Hippoglossus hippoglossus (Atlantic halibut): 117777060
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Entry
117777060 CDS
T07778
Symbol
atg5
Name
(RefSeq) autophagy protein 5
KO
K08339
autophagy-related protein 5
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04136
Autophagy - other
hhip04140
Autophagy - animal
hhip04216
Ferroptosis
hhip04621
NOD-like receptor signaling pathway
hhip04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117777060 (atg5)
04136 Autophagy - other
117777060 (atg5)
09143 Cell growth and death
04216 Ferroptosis
117777060 (atg5)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117777060 (atg5)
04622 RIG-I-like receptor signaling pathway
117777060 (atg5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117777060 (atg5)
03029 Mitochondrial biogenesis [BR:
hhip03029
]
117777060 (atg5)
Membrane trafficking [BR:
hhip04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
117777060 (atg5)
Mitochondrial biogenesis [BR:
hhip03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117777060 (atg5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_UblB
ATG5_HBR
DUF6782
Motif
Other DBs
NCBI-GeneID:
117777060
NCBI-ProteinID:
XP_034467450
LinkDB
All DBs
Position
16:1791875..1817257
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AA seq
275 aa
AA seq
DB search
MADDKDVLRDVWFGRIPACFTLNQDEVTEREAEPYYLLLPRVSYLTLVTDKVKKHFLKVM
KAEDVEEMWCEYEGTPLKWHYPIGVLFDLHASNTVLPWNITVHFKNFPDRDLLHCPSNSV
IEAHFMSSIKEADALKHKSQVVNDMQKKDHKQLWMGLQNDKFDQFWAMNRKLMEYPTEDG
GFRYIPFRIYLTMSDRPFIQRLFRPVSPEGNVHTLGNMLKEMYPAAIPNEGEPKQNQVVI
HGIEPLLETPLQWLSEHLSHPDNFLHICVVPVPTD
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgacaaggacgtgttgagggacgtgtggttcggccggatccccgcctgcttc
accctgaaccaggacgaggtcaccgagagagaggccgagccctactacctgctgctgccc
agggtgagctacctgacgctggtcaccgacaaagtgaagaaacacttcctcaaagtgatg
aaggccgaggacgtggaggagatgtggtgcgagtatgaaggaacaccactgaaatggcac
tatccaattggagttctctttgacctccacgcctccaacacggtcttaccctggaacatc
actgtgcactttaaaaattttccagatcgcgacctcctccactgtccgtccaactctgtg
atcgaggctcacttcatgtccagcatcaaggaggccgacgccctcaagcacaagagccaa
gttgttaacgacatgcagaagaaagaccacaaacagctgtggatgggtctgcagaacgat
aagtttgaccagttctgggccatgaacaggaagctgatggaatatcccactgaggacgga
ggcttcagatacatccccttcaggatatacctgacgatgagcgataggccgttcatccag
agactgtttcgccccgtttcacctgaaggcaacgtgcacacacttggcaacatgctcaaa
gaaatgtacccagctgctataccaaatgaaggtgagccaaagcagaaccaggtggtgatc
cacggcatcgagccgctgctggagacgcctctgcagtggctcagcgaacacctcagccac
cctgacaacttcctgcacatctgcgttgtccccgttcccaccgactga
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