Hippoglossus hippoglossus (Atlantic halibut): 117777063
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Entry
117777063 CDS
T07778
Symbol
tmc8
Name
(RefSeq) LOW QUALITY PROTEIN: transmembrane channel-like protein 7
KO
K21988
transmembrane channel-like protein
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hhip02000
]
117777063 (tmc8)
03037 Cilium and associated proteins [BR:
hhip03037
]
117777063 (tmc8)
Transporters [BR:
hhip02000
]
Other transporters
Pores ion channels [TC:
1
]
117777063 (tmc8)
Cilium and associated proteins [BR:
hhip03037
]
Other cilia and associated proteins
Stereociliary proteins
117777063 (tmc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
117777063
NCBI-ProteinID:
XP_034467490
LinkDB
All DBs
Position
1:complement(8812206..8819814)
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AA seq
708 aa
AA seq
DB search
MEEDHSVNFMRLLSDESTHSTLSVDSCEYYQTEIFDQLPSIQASRPGLSRQDSLEACEAY
QGSTEPRERLRNGHLSRGSRDKVSMQPLRNLPMCIQAKRQARVRRKMQISNIGFWESWRR
SQSINRKKVWVQMGGALSGLLPWQPTLRSIEGRFGVGVKAYFVFLRYLIYLNILHCALIG
GFILGPSTFYGRGNSSEPLKFGGDDSVLDFFQGSGFVDRSPVFFAFYTRGSLNFPCLNTP
LLYFAGILTILFLSLIMVVRRTTVGFKHRWMLGRRYSTIVSYKVFCGWPFTIQHPDAATL
KRSFIRNDLKLFLEEQSFSLRVAQRTFGQRIRLYLLRFFLNMVVLSLLGAAFYLIFYAIT
KSLSASGHNWLSSLFLQYLPPITITFVNLLLPHIFRKISSFEDYSFTTQVNATLVRSIFL
KLASLGIYLYYSFNATTERQQHPCRENQFGREMYKLCIFNFLATFCNTFLFSYPRNLLHE
KYPTSLLARLLGKQLFLIPFNVLDLVYSQTVSWVGIYYCPLLPLIGTVTLVATFYIKKFT
VLRCCVAEHRMFRASTSSVLFHFMLLLGLIMAASAVGFNLYRQDNASSCGPSGNGETVFN
VTGVCVNSLPSLAQSTLRYLASEAFALPLILAEIIILTSYVSRGRANQKAIERLKDMLVM
SSSDKRFLVKQHTTVLRRQRDNRRVGSASAIGEDAAPSRRRDPPHRLT
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaccactctgtcaacttcatgagactcttatcagatgagagcactcactca
acgctgtcggtggactcctgtgagtactaccagacagagatatttgatcagctgcccagc
atccaggcttcacgacctgggctgagcagacaggattctttggaagcctgcgaggcctac
cagggcagcacagagccgagggagaggctccgcaatggccacctgtccagaggatccaga
gacaaggtgtcaatgcagccacttcggaacctgcccatgtgtattcaggcgaagcgacaa
gccagggtcaggaggaagatgcaaatcagcaacattggtttttgggagtcctggaggcgg
agccagagcatcaacaggaagaaggtgtgggtgcagatgggaggagctctgtctggcctg
ttgccatggcagccaactcttcgttccattgaaggcaggtttggagttggcgtgaaggcc
tactttgttttcctcagatacttgatttacttgaacatacttcactgtgctcttatcggg
ggatttattcttgggccttcaacgttttatggcagaggcaacagcagtgaacctttgaag
ttcggaggcgatgattccgttttagatttcttccagggatcgggcttcgtggatcgttct
ccggtcttctttgctttttatacccgtggatccctgaattttccgtgcttgaatacaccc
ctgctttactttgctgggatcctcaccatcctcttcctcagtctcatcatggtggtccgc
agaacaacagttggcttcaagcacaggtggatgctcgggaggcgttacagtacgattgtg
agctataaggtcttctgtggttggcccttcaccatccagcaccccgatgcagcgactctc
aaacgcagcttcatcaggaacgatctcaagctcttcctggaggagcagagcttctccctg
cgagtggctcagaggacttttggacaaaggatccgtctctacctgctcaggttcttctta
aacatggtcgttctgtctctgctgggtgcagccttctacctcatcttctatgccataacg
aaatcactgtctgcgagtgggcacaactggttgtccagtctgttcctccagtatcttcct
cccatcaccatcacctttgtcaacctgctcctcccccacatcttccgtaagatctcgtct
tttgaagattactctttcaccacgcaggttaacgccacacttgtgaggagcatcttcttg
aagctggcctcactggggatctacttatattactctttcaacgccacaacagagcgtcag
cagcatccgtgcagggagaaccagtttggcagagagatgtacaagctgtgtattttcaat
ttcctcgccaccttctgcaacacctttctgtttagctaccccaggaatttgttgcatgag
aagtaccccacatccttgctggcccggttgttggggaaacaactcttcttgatccctttc
aatgtgttggatctggtgtacagtcagactgtgtcctgggtgggcatctactactgccct
ctgctgcctctgataggaactgtcacactggtggccacgttctacatcaaaaagttcaca
gtgttgcgatgctgtgttgccgagcaccgcatgtttcgagcctccacgtcctcggtttta
ttccacttcatgttgctgctcggtctcatcatggctgcatccgcagtgggcttcaacctc
taccgacaagacaatgcgtcctcctgtggtccatctggaaatggagaaacagtgtttaat
gtgacaggagtttgtgtgaatagtctgcccagcctggcacagagcactctccgctacctg
gcctctgaggccttcgccctgccactcatactcgctgaaattataatcttaacgtcctat
gtgtcacggggtcgagccaatcagaaggccatcgagagactgaaagacatgctggtcatg
agtagctcagataagcgtttcctggtgaaacagcacaccacagtgctcagacgtcagagg
gacaaccgcagagtgggttccgccagcgccatcggagaggacgccgcccccagtcgcagg
agagaccccccccatcgcctcacatag
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