Hippoglossus hippoglossus (Atlantic halibut): 117777075
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Entry
117777075 CDS
T07778
Symbol
sntb1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117777075 (sntb1)
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_2
PDZ_6
PH_9
Motif
Other DBs
NCBI-GeneID:
117777075
NCBI-ProteinID:
XP_034467485
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Position
16:complement(15379541..15417418)
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AA seq
552 aa
AA seq
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MVFERNAPKMAVVVAGSSGVPKSGFVEVLVREQWHKVLANLNEEALTLSCEEGDGVSDNV
NSNGVTNGSYLDNNNTNSNNGPQTVRTAFTDLPERVPEAIANRKRCVKVCKQEIGGLGIS
IKGGKENKMPILISKIFKGLAADQTQALYVGDAILSVNGMNLRDATHDEAVQALKRAGKD
VTLEVKYMREATPYVKKGSPVSEIGWETPPPESPRIGSPPITSPSSSDPSNPTTQPSLSP
LGDRRCIPLKMCCVTRAMTTPDLENRQLELHSPDARHTVVLRCPDQPSALSWFSAMHSVT
STLAQRALAEVIQDTARTGIGSREIRHLGWLAGKTESEKQSWRPVLVVLTEKDLLLYDSL
PRSKEAWQGPEHTYPLLATRLVHSGPDRGSPHSGTELYFATRTGTRLGIETHLFRAETTK
DLSLWTRHIVNGCHASAEMIKEVTTSCMYQSQECRLVIHYEQGFSVLADPKLDDGENGDA
GGAHTPTRPRVLLSYPYEKLKMSSDDGVRMLSLDFGGKEGEIQLDLHSCPKPIVFILHSF
LSAKIARLGLVA
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggtatttgagagaaatgctccaaagatggcggtggtagtcgcgggttcctccggagtg
ccaaaaagtggattcgtggaggtgttggtgcgggagcagtggcacaaagttttggccaac
ttgaacgaggaagcgctcacgctgagctgcgaggagggcgacggcgtgagcgacaatgtc
aactccaacggcgtcacgaacggatcctacctggacaacaacaacaccaactccaacaac
ggcccccagaccgtgcgcaccgcgttcacggacctcccggagcgagtgcccgaggcgatc
gccaaccgaaagcggtgcgtcaaggtgtgcaagcaggagatcggcgggctggggatcagc
atcaagggcggcaaggagaacaaaatgcccatcctcatcagtaagatcttcaaggggctc
gcagcggaccagacccaggctctgtacgtcggggacgccatcctgtccgtgaacggcatg
aacctgcgggacgcgacccacgacgaggcggtgcaggcgctgaagcgggccgggaaagac
gtgactctggaagtcaagtacatgcgcgaggcaacgccgtacgtcaaaaagggctcccct
gtgtcagagatcggctgggaaaccccccctccggagtctccccgcatcggcagccctccc
atcacctccccctcctcatccgacccttcgaaccccaccacccagccctccctgtctccc
ctcggtgacaggaggtgcataccgctcaagatgtgttgtgtaacccgagcaatgaccacg
ccagaccttgagaacagacaactggagctgcactcccctgacgccaggcacactgtggtg
ctgcggtgcccggatcaaccatctgccctgtcctggttctctgccatgcactctgtcaca
tccacactggcacagcgggcactggcagaggtcatccaggacacagccaggacgggaatt
ggcagcagagagatacgacacctgggatggttggcagggaagacagagagtgagaagcag
agctggaggccggtgctggtggtgctgacagagaaagacctgctgctgtacgacagtcta
ccacgaagcaaggaggcctggcagggtccggaacacacttatccacttttagcaacacgc
ctggtccactctggtcctgaccgggggtcccctcactctggcactgagctgtatttcgcc
actcggaccggcacacgactcggcatcgagactcacctgttccgggctgagacgaccaag
gatctgtccctgtggaccagacacattgtgaacggatgtcacgcctccgctgagatgatc
aaagaagtcacgacgagttgtatgtaccagagtcaggagtgcaggctggtgattcactac
gaacagggcttctctgtgctggctgaccccaaactggacgatggggagaacggggacgcg
ggaggagcgcacactcccaccaggcccagggtgctgctctcctacccctacgaaaaactc
aagatgtcctcggatgacggagttcgcatgctgtccctcgactttggagggaaggagggg
gagattcaactggacctccactcgtgtccaaaaccgatcgtcttcatcctccactcgttc
ctctctgctaagatcgcccgcctgggtctggttgcctga
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