Hippoglossus hippoglossus (Atlantic halibut): 117777135
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Entry
117777135 CDS
T07778
Name
(RefSeq) polycomb protein SCMH1 isoform X1
KO
K11461
polycomb protein SCMH1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117777135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhip03036
]
117777135
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
117777135
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
RBR
SAM_1
SAM_2
SAM_PNT
MRI
Motif
Other DBs
NCBI-GeneID:
117777135
NCBI-ProteinID:
XP_034467573
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Position
16:7509696..7524752
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AA seq
725 aa
AA seq
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MRKPVPQKAIEWKDARRIKHARSGRPSRVPSQYQGHFSWEKYLKETGAAAAPASCFKQSP
TPPVNEFKAGMKLEAQDPRNTTSTCIATVVGLTGSRLRLRLDGSDNKNDFWRLVDSSEIQ
PIGSCEKSGGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPSRIFHKQEPPAPEQNSFQMG
MKLEAVDRKNPHFICPATVGALRGVEVLVTFDGWRGAFDYYCRYDSRDIFPVGWCSLTGD
NLQPPGTKVVLPKSLGALTDGSVETPAMHPTPTVGRPPGQRGRKPGRRKTKVTVPWGQKA
SALGPQSIQPSKDLEPIKIPKKRGPKPGNKLSWAKRAGWLEDAMAGPGRPATGPGRTRGR
LPANWTQTIALQQAQTQAQPIKIPKKRGPKPGSKRKPRVVPNPVPTSPTSSTPEPDTSTV
PLDNATIPNSALQAPTVCVYLNKYGKVGPHLDQRRIQQLPDHFGPGRASSVLQQCVQACV
DSAHNQSTVFSCLKSGQGGEVISAYFDEQQHTLTLPTVSSVTYVLRFLEKLCHNLHCDAL
FGSQPVARGALHYNSHTYTTERRSFGDSLTTGPGNKRFLQNYNSPLPQKLAKISRHSTDG
ESFMENSVATSEHLKKSPLSPNSTALSPGLRSPTKLLHHNNFTGSLRESPRPSGQDPNLW
TVEDVMKYIREIDPVLAPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLTFHID
KLKRQ
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaacccgtaccacagaaagctatagagtggaaagatgccagaaggatcaagcat
gcccggagtggacggccctcccgggtgccttcacagtaccaaggacatttcagctgggag
aaatacttgaaagagaccggcgctgctgctgcacctgcttcatgcttcaaacagagtccc
acgcctccggttaacgagttcaaggccgggatgaagctggaggcccaggacccgcggaac
accacgtccacctgcatcgccacagtggtgggcctgacgggctcgcggctgcggctgcgt
ttggacggctccgacaacaagaacgacttctggcgcttggtggactcctcagagatccag
cctattggcagctgtgagaagagtggaggcatgctgcagccaccacttggtttccgtctc
aacgcttcctcctggcccatgttcctactgaaaacactaaatggagctgagatggcaccg
tctcgcatttttcacaagcaggagcctcccgcaccggagcaaaactcctttcagatgggc
atgaagctggaggcggtggaccggaaaaacccccactttatctgtccagccacagtgggt
gcgctgcgtggtgttgaggtgctggtcacctttgatggctggcggggggcctttgactac
tactgccgctacgactcacgcgacatcttccctgttggctggtgctcactcaccggagac
aacctccagccgcctggtaccaaagtagtgttgcctaagagtcttggggcgttaacagat
gggagtgtagagactccagccatgcaccccaccccaacagtgggcagacctccgggtcag
agagggcggaagccaggccggaggaaaaccaaggtcacagtgccctggggtcagaaggct
tcagccttgggaccacagagcatccagccgagcaaagaccttgagcccatcaagatcccc
aaaaaacgagggcccaagcctggcaataagctgagctgggcaaagagagctggctggctg
gaagatgccatggctggcccgggacggccggcgacaggccccgggcgaaccaggggcaga
ctgccggccaactggacacagacgatagctctgcagcaggcccagactcaggcacaaccc
atcaagatcccaaagaaacgagggcccaagcctggcagcaagagaaaaccacgcgtggta
cctaatccagtccccacgtctcccaccagcagcaccccagagcccgacaccagcactgtg
cctctggacaatgccaccatccccaactctgcactacaggctcccacagtttgtgtctac
ctaaacaagtacggcaaagtgggaccgcatttggaccagcggcggatccagcagctcccg
gaccattttgggccaggccgagcgtcctcagtgcttcagcagtgtgtccaggcttgtgtg
gactccgctcacaaccagagcaccgtcttctcttgccttaaatccggccaaggtggtgaa
gtcatttctgcgtactttgacgagcagcagcacaccctgaccctgcccacagtcagcagc
gtcacctacgtcctccgcttcctggaaaagctttgccacaaccttcactgcgatgcgctg
tttggcagccagcctgttgccagaggagccctgcactacaacagtcacacgtacacgaca
gagaggagaagttttggtgacagcctgacgacgggcccgggcaacaagaggttcctccag
aactacaacagtccgttaccacagaaactggccaaaatctcccgacactccaccgatggt
gagtccttcatggagaacagcgtcgccacatccgagcacttaaagaaaagccccctctct
ccaaactctacggctttgtcaccgggtctcaggtctcccaccaaactgctgcatcacaat
aacttcacaggcagtttacgggagagcccgagacccagtggtcaggaccccaacctgtgg
acggtggaggacgtcatgaagtacatcagagaaatcgaccccgtgctggcaccacacgct
gacctttttagaaaacatgagattgacggcaaggcactcctgttgctgcgtagcgacatg
atgatgaaatatatgggcttgaagctcggccccgccctcaaactcaccttccacatcgac
aagctcaagcggcagtga
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