Hippoglossus hippoglossus (Atlantic halibut): 117777204
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Entry
117777204 CDS
T07778
Symbol
irx1a
Name
(RefSeq) iroquois-class homeodomain protein IRX-1a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhip03000
]
117777204 (irx1a)
Transcription factors [BR:
hhip03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
117777204 (irx1a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
117777204
NCBI-ProteinID:
XP_034467710
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All DBs
Position
16:16774153..16779371
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AA seq
493 aa
AA seq
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MSFPQLGYPQYLSASQAVYGGERPGVLTSSSRGGSSEIGGSPSATAAAVSSVLGMYANPY
AHNYSAFLPYTSADLALFSQMGSQYELKDSPGVHPGSFAAHTSPAFYPYGQFQYGDPARP
KNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKV
TWGRSKEDGEENLFGSGDEAEKNEDEEEIDLESIDIDKIDDNDGDQSNEDDDDKSTEGSR
EHRGGVGAGGELDSLEKRRAFALQAHEAFDKSKSTISVHAGSKESSDGNNNNTTRVLSPD
RSGSFPLPSNNKPKIWSLAETATSPDTSSQKPSSPCGPAATTHPSAPHHQIQTHPAFLPS
HGLYTCQIGKFHNWTNGAFLGQNSLLNVRSFLGVNQHHHHHHNHHLQQQQQQPTSVVVSP
VAAAAALSNDSKAPRETHSPKHIDHENGVRSVSPPTQILKSSFRPIHDRSSLPSSARSPP
DATQRVLTALSSA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccccagctaggctacccgcagtacttaagtgcctcccaggcggtgtacggg
ggcgagagaccgggagtgcttacgtcttcgtcccgcggagggagctccgaaatcgggggt
agtccttccgccaccgcggcggcggtcagttcggtgttgggcatgtacgccaacccgtac
gcgcacaactacagcgctttcttaccttacaccagcgcggacctggctcttttctcacaa
atggggtcccagtatgagctgaaggacagtcctggcgtgcaccctggcagcttcgcagcc
cacacctcacctgccttctacccatacggtcagttccagtacggggacccggccaggccc
aagaacgccacccgggagagcaccagcaccctgaaggcctggctcaacgagcacaggaaa
aacccgtacccgaccaagggcgagaagatcatgctggccatcatcaccaagatgacgctg
acgcaggtctccacctggttcgccaacgccaggaggaggctcaagaaggagaacaaggtg
acctggggcaggagcaaagaggacggggaggagaacttgttcggcagcggggacgaggcg
gagaagaacgaagacgaggaggagatcgatttggagagcattgacatcgacaagatcgac
gacaacgacggggatcagagcaacgaggacgatgacgataaatcgacggagggcagcagg
gagcacaggggcggtgtgggtgcggggggagagttggacagcttggagaaaagacgggcc
ttcgccctgcaggcccacgaggcctttgacaaatcgaagagcacaatttcagttcacgca
gggagtaaggagagctcggacggcaacaacaacaacacgactagagttttgtctccggac
agatccgggagctttcctctcccgtccaacaacaagcctaagatctggtctctagcagag
accgccactagccccgacacttcatcccagaaaccctcgtccccctgtggccccgcggcc
accactcacccgtcagccccccaccaccagatccaaacccacccggccttcctccccagc
cacggactgtacacttgccagattggaaagttccacaactggacgaacggggctttcctg
ggccagaactccctgctcaacgtgcggtcgtttctgggagtaaaccagcaccatcaccac
caccacaaccaccacttgcagcagcagcagcagcagccgacgtcggtggtggtgtctccg
gtagcagctgcagcagcgctcagcaatgacagcaaggccccacgagagacccacagtccc
aaacacatagaccatgaaaacggtgtaaggtctgtttcacctccaacacagatcctgaag
tcttcctttcgacccatccatgacagatcctctctgccttccagcgccaggagtccacca
gacgccacgcaacgcgtcctcactgctctctcctcggcttga
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