Hippoglossus hippoglossus (Atlantic halibut): 117777291
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Entry
117777291 CDS
T07778
Symbol
irx2a
Name
(RefSeq) iroquois-class homeodomain protein IRX-2a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhip03000
]
117777291 (irx2a)
Transcription factors [BR:
hhip03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
117777291 (irx2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
117777291
NCBI-ProteinID:
XP_034467855
LinkDB
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Position
16:complement(16629855..16635765)
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AA seq
530 aa
AA seq
DB search
MSYPQGYLYQPPGSLALYSCPAYGASALAAPRSEDLARSSSGSAFSPYPGSAAFSASAGA
GFSSPLSYSTDPTTGFPSYMSSPYDAHTTGMAGALGYHPYGSPGYPYQLNDPAYRKNATR
DATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPR
NKSEDEDEEDGDGERKEVERSEKNLDNSEASAEDEGISLHVDTLTDHSCPSESDGEKVSC
RVAELSSDQAGDKCDDDGEDQNHDPRAQLSPKAVTSSPLTGVEAPVLGHHHHHHHPHHLH
HHLHHLHHLHSQREDLARSLVSSSGLSASKPSPCLESRAPSGAPQIPAAKPKLWSLAEIA
TSDQKQQHPQQQPPGQPAGQPTCPSSSGGGLLTPPTSSTSSPAASSPSLYPAPSILGRPI
YYTSPFYSNYTNYGNFSPLQGQGILRYTNSSGVSLAAAAAAAAAAAAAAAAANEGLSSSH
QGLEASTNPKHRPDSPLVKNNPNHIVVVEQQQQQQQQLFRAAHLEAKKGT
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcctcagggttacctctaccagcccccgggctctctggctctgtattcgtgt
ccggcgtacggggcctcggctctggctgccccgcggagcgaggacctggcgcggtcgtcc
tccggctcagccttcagcccttaccctggatcggctgctttctccgcgtcggccggcgca
ggcttctccagtccgctgtcatactccacggatccgacgacgggattcccatcctacatg
agctctccatatgacgcgcacacgacgggcatggcgggggcgctgggttaccacccatac
gggagccccgggtacccgtaccagctcaacgacccggcttaccgcaagaacgccaccagg
gacgccacggccaccctgaaggcctggctgcaggagcacaggaagaacccgtacccgacc
aaaggggaaaagatcatgctggccattatcaccaagatgaccctgacgcaggtctccacg
tggttcgccaacgcccggcggaggctcaagaaggagaacaagatgacctgggcgcccagg
aacaagagcgaggacgaggacgaggaggacggggacggggagaggaaggaggtggagcgc
tccgagaagaacctggacaacagcgaggcgtcggcggaggatgaagggatcagtttgcac
gtggacactctgacggaccactcctgcccctcggagtcggacggggagaaggtcagctgc
cgcgtggccgagctgagctccgaccaagccggcgacaagtgcgacgacgacggcgaggac
cagaaccacgacccgcgggctcagctctcgcccaaggccgtcacgtcgtctccgctcacg
ggagtggaggcgccggttctcggccaccatcaccaccaccaccacccacaccatctccac
caccacctgcatcacctccaccacctccacagccagcgggaggacctggcccggagcctc
gtcagcagcagcggcctcagcgccagtaaaccgtccccgtgcctggagagccgggctccg
tcgggggcgcctcagatccccgcagccaagcccaagctgtggtcgctggcggagattgct
acctcggaccaaaagcagcaacatccgcagcagcagccaccggggcagcctgcggggcaa
ccgacctgcccctcctcctccggcgggggcctcctcactccccccacgtcctccaccagc
tccccggctgccagctccccctccctctacccggccccctccatccttggaagacctatt
tattacacttctcccttttatagcaattacacaaactatggcaacttcagccccctgcag
ggccaagggatcctgcgctacactaattcgtctggagtgagtctggccgccgcagccgcc
gccgccgctgccgccgccgccgccgccgctgctgcgaacgagggcctgagctcctcgcac
caggggctggaggcgagcacgaaccccaagcacaggccagactcccccctcgttaaaaat
aacccaaaccacattgttgttgtcgagcagcagcagcagcaacaacaacagcttttcaga
gccgcacatttagaggcgaagaaaggtacgtaa
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