Hippoglossus hippoglossus (Atlantic halibut): 117777311
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Entry
117777311 CDS
T07778
Symbol
psmc4
Name
(RefSeq) 26S proteasome regulatory subunit 6B
KO
K03063
26S proteasome regulatory subunit T3
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
117777311 (psmc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
hhip03051
]
117777311 (psmc4)
Proteasome [BR:
hhip03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
117777311 (psmc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_5
AAA_2
AAA_16
RuvB_N
AAA_22
nSTAND3
DUF815
NPHP3_N
AAA_28
RNA_helicase
AAA_14
Mg_chelatase
TIP49
NTPase_1
TsaE
ATPase_2
NACHT
AAA_3
AAA_lid_PRS2_C
AAA_7
AAA_33
NB-ARC
Parvo_NS1
AAA_25
AAA_17
AAA_18
IstB_IS21
AAA_24
ABC_tran
DUF3450
Motif
Other DBs
NCBI-GeneID:
117777311
NCBI-ProteinID:
XP_034467892
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All DBs
Position
16:5122326..5129515
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AA seq
417 aa
AA seq
DB search
MEDLVAVEKSPEDMPATLSSRPQTGLSFLAPEPEDLEDLYSRYKKLQQELEFLEVQEEYI
KDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDR
ELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAV
ELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLG
EGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQ
NVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLE
DYVARPDKVSGADINSICQEAGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggaggatctcgtagctgtagagaagagcccggaagacatgccggcaacactgagctcc
agaccccagacagggctctccttcctggcacctgagccagaggatctcgaggacctgtac
agcagatacaagaagctgcagcaggagctggagttcctggaggtgcaggaggagtacatt
aaagatgaacagaaaaacctaaagaaagagtttctccacgctcaggaggaggtgaagagg
atacagagcatcccactcgtcattggccagttcctggaagctgttgaccagaatacggct
attgttggctccactacagggtccaactactatgtgcgcatcctgagcaccatcgacaga
gagctgctgaagcccaacgcttcagtggccttgcacaaacacagcaatgccctggtagat
gtgctccctcctgaagctgacagcagcatcatgatgctgacgtcagaccaaaagccagat
gtgatgtatgctgacattggtggtatggatatccagaagcaggaagtcagggaggcagtg
gagctgccacttactcactttgaactctacaaacagattggtattgacccacccaggggt
gtccttatgtacggacctcccggttgtggtaagaccatgttggccaaggctgtggcgcac
cacactacagctgcgttcatccgtgtggttggctctgagtttgttcagaagtatttgggt
gaaggccctcgtatggtgcgtgacgtcttccggctggcgaaagaaaatgctcctgccatc
attttcattgatgagattgatgctatcgccactaagcgctttgatgcacagactggagct
gacagggaggtgcagagaatcttgcttgagctgcttaatcaaatggacggcttcgaccag
aacgtcaacgtcaaggtgatcatggccaccaacagagcagacacactggacccagccctg
ctacgccctggtcgtttggacagaaagattgagttccccctgcctgaccgcaggcagaaa
cgtctcattttctccaccatcaccagtaaaatgaacctctccgaggaggttgacctggag
gactatgtggccagaccagacaaggtctctggagctgatataaactccatctgccaggag
gctggcatgttggcagtgcgtgagaacaggtatatcgtcctggccaaagacttcgaaaaa
gcttacaagaccgtgatcaaaaaggatgagcaggagcacgagttctacaagtag
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