KEGG   Hippoglossus hippoglossus (Atlantic halibut): 117777354
Entry
117777354         CDS       T07778                                 
Symbol
limd1a
Name
(RefSeq) LIM domain-containing protein 1
  KO
K16682  LIM domain-containing protein
Organism
hhip  Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:hhip00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hhip03019]
    117777354 (limd1a)
   03036 Chromosome and associated proteins [BR:hhip03036]
    117777354 (limd1a)
Messenger RNA biogenesis [BR:hhip03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117777354 (limd1a)
Chromosome and associated proteins [BR:hhip03036]
 Eukaryotic type
  Sister chromatid separation proteins
   Aurora kinases
    Regulators of Aurora kinases
     117777354 (limd1a)
SSDB
Motif
Pfam: LIM zf_RING_Vps8 Mut7-C DUF6487
Other DBs
NCBI-GeneID: 117777354
NCBI-ProteinID: XP_034467953
LinkDB
Position
16:14957591..14976744
AA seq 612 aa
MDKYEDLGLEASKFIEDLNMYEASRDGLFRTRSHAGNNPDFEETRKVFASKMTKIHMQKH
QEEMAKTTQAIKMNGGHSSTYYTKDRPPINSFRQPGEAAAKPPMLSGPASGTGSQYAPFD
GHKHHPGVQCELPAGRAYGYGNSYDNQEPHSYQNNSPTPPPSPGNVSHCAPTHARHPVSQ
PAAWAPCRESQLSPCPSESSTSSQPPRLPAPPTVNSLPSQQSQAGIPASVNRSPPSSAGP
VRGWAGDPPGSARPDLIPALPLSAFTGGADFHVHQSSTQPAAYYAPPSPTLRSSPIHNGP
GRASPVQPAPPESPQPKVQVASAAFSHATVSKSSSQSQGQSQIPSCGQALIAEAEALRSP
RAAQPPCQSLLTQPLDQGPSAAEIKLEALTKRLEKEMDAQPKADYFGVCVKCNKAVHGAN
QACQAMGSLYHDSCFTCSACSRKLRGKAFYYVGGKVFCEEDFLYSGFQQSADKCNACGHL
IMDMILQALGKSYHPGCFRCVVCNESLDGVPFTVDTENKIYCVKDYHRVLAPKCAACNQP
ILPSEGSDETVRVVSMDKDYHVECYHCEDCKKELNDEEGHRCYPLNGHLLCHSCHLKNIE
PGCSSPVTTSSF
NT seq 1839 nt   +upstreamnt  +downstreamnt
atggataaatacgaggatttgggactggaggcgagtaagttcatcgaggacctgaacatg
tacgaagcatcccgggatggtttgtttcggacgaggagtcatgcgggaaacaacccagac
tttgaggagacgcgaaaggtcttcgcctctaaaatgactaaaatccacatgcagaagcac
caggaggagatggccaaaaccacccaggctattaaaatgaatggaggtcacagcagcact
tattacaccaaagacaggccgcccatcaacagtttcaggcagccgggggaggcggcagcg
aagcccccgatgctctccggccctgcgtcgggcaccgggagtcagtacgcgccgtttgac
ggccataaacaccacccgggggtccagtgtgagctcccagcagggcgggcatatggctac
gggaacagctacgacaaccaggagccgcattcataccagaacaacagccctactcctcct
ccgagcccaggaaacgtgtctcactgcgcgcccacacatgctcgtcacccggtcagccag
ccggccgcctgggccccctgccgggagagccagctctctccgtgtccgtctgagagcagc
acttcatctcagcccccgcgcctccctgcgccccccaccgtcaacagccttccatcccag
cagagccaggctggcatccctgcttctgtaaacaggagtccaccctcctctgccgggccg
gtcaggggttgggccggagatcctcctggctctgccagaccagacctcatccccgccctg
cctctgagtgccttcacagggggagcagatttccacgtgcatcagtcctccacgcagcct
gcagcctactatgcaccaccttctccaactttaagatcctctcccatccacaatggccct
ggcagagcttcccctgtccaacctgcaccccctgaatcacctcaacccaaggtccaggtg
gcatctgctgccttcagccatgccactgtctccaaaagcagcagccagagtcaaggtcag
agccaaataccgagctgtggacaggctctcattgctgaagccgaggccctccgttccccc
agggctgcccagccaccctgccagtctctactcacgcaaccccttgatcaggggccctcg
gctgctgaaataaaattagaagctctcactaaacgtctggaaaaagagatggatgcccag
ccaaaggccgactactttggagtgtgtgtgaagtgtaacaaggccgtgcatggagccaac
caggcctgccaggcgatggggagcctctaccatgacagctgcttcacctgcagtgcctgc
agtcgaaagctgagagggaaggctttctactatgtcggagggaaggttttctgtgaagag
gactttctgtactctggttttcaacagtctgcagacaagtgcaacgcttgtggacatctg
attatggacatgatcctgcaagccctcgggaagtcctatcaccccggctgtttccgctgc
gtcgtctgtaacgagagccttgatggagtgcccttcactgtggacactgaaaacaagatc
tactgtgtcaaagactaccacagggtcctggccccgaaatgtgcagcgtgtaatcagccc
atcctgccctcagaggggtctgatgaaaccgttcgagttgtatccatggacaaggactac
cacgtggaatgctatcactgtgaggattgcaagaaggagctgaacgacgaggagggtcac
cgctgctaccccctgaacggccacctcctctgccactcctgccacctgaagaacatcgag
cccggctgctcctctcctgtcacgacctcctccttctga

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