Hippoglossus hippoglossus (Atlantic halibut): 117777354
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Entry
117777354 CDS
T07778
Symbol
limd1a
Name
(RefSeq) LIM domain-containing protein 1
KO
K16682
LIM domain-containing protein
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117777354 (limd1a)
03036 Chromosome and associated proteins [BR:
hhip03036
]
117777354 (limd1a)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117777354 (limd1a)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
117777354 (limd1a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
zf_RING_Vps8
Mut7-C
DUF6487
Motif
Other DBs
NCBI-GeneID:
117777354
NCBI-ProteinID:
XP_034467953
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All DBs
Position
16:14957591..14976744
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AA seq
612 aa
AA seq
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MDKYEDLGLEASKFIEDLNMYEASRDGLFRTRSHAGNNPDFEETRKVFASKMTKIHMQKH
QEEMAKTTQAIKMNGGHSSTYYTKDRPPINSFRQPGEAAAKPPMLSGPASGTGSQYAPFD
GHKHHPGVQCELPAGRAYGYGNSYDNQEPHSYQNNSPTPPPSPGNVSHCAPTHARHPVSQ
PAAWAPCRESQLSPCPSESSTSSQPPRLPAPPTVNSLPSQQSQAGIPASVNRSPPSSAGP
VRGWAGDPPGSARPDLIPALPLSAFTGGADFHVHQSSTQPAAYYAPPSPTLRSSPIHNGP
GRASPVQPAPPESPQPKVQVASAAFSHATVSKSSSQSQGQSQIPSCGQALIAEAEALRSP
RAAQPPCQSLLTQPLDQGPSAAEIKLEALTKRLEKEMDAQPKADYFGVCVKCNKAVHGAN
QACQAMGSLYHDSCFTCSACSRKLRGKAFYYVGGKVFCEEDFLYSGFQQSADKCNACGHL
IMDMILQALGKSYHPGCFRCVVCNESLDGVPFTVDTENKIYCVKDYHRVLAPKCAACNQP
ILPSEGSDETVRVVSMDKDYHVECYHCEDCKKELNDEEGHRCYPLNGHLLCHSCHLKNIE
PGCSSPVTTSSF
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggataaatacgaggatttgggactggaggcgagtaagttcatcgaggacctgaacatg
tacgaagcatcccgggatggtttgtttcggacgaggagtcatgcgggaaacaacccagac
tttgaggagacgcgaaaggtcttcgcctctaaaatgactaaaatccacatgcagaagcac
caggaggagatggccaaaaccacccaggctattaaaatgaatggaggtcacagcagcact
tattacaccaaagacaggccgcccatcaacagtttcaggcagccgggggaggcggcagcg
aagcccccgatgctctccggccctgcgtcgggcaccgggagtcagtacgcgccgtttgac
ggccataaacaccacccgggggtccagtgtgagctcccagcagggcgggcatatggctac
gggaacagctacgacaaccaggagccgcattcataccagaacaacagccctactcctcct
ccgagcccaggaaacgtgtctcactgcgcgcccacacatgctcgtcacccggtcagccag
ccggccgcctgggccccctgccgggagagccagctctctccgtgtccgtctgagagcagc
acttcatctcagcccccgcgcctccctgcgccccccaccgtcaacagccttccatcccag
cagagccaggctggcatccctgcttctgtaaacaggagtccaccctcctctgccgggccg
gtcaggggttgggccggagatcctcctggctctgccagaccagacctcatccccgccctg
cctctgagtgccttcacagggggagcagatttccacgtgcatcagtcctccacgcagcct
gcagcctactatgcaccaccttctccaactttaagatcctctcccatccacaatggccct
ggcagagcttcccctgtccaacctgcaccccctgaatcacctcaacccaaggtccaggtg
gcatctgctgccttcagccatgccactgtctccaaaagcagcagccagagtcaaggtcag
agccaaataccgagctgtggacaggctctcattgctgaagccgaggccctccgttccccc
agggctgcccagccaccctgccagtctctactcacgcaaccccttgatcaggggccctcg
gctgctgaaataaaattagaagctctcactaaacgtctggaaaaagagatggatgcccag
ccaaaggccgactactttggagtgtgtgtgaagtgtaacaaggccgtgcatggagccaac
caggcctgccaggcgatggggagcctctaccatgacagctgcttcacctgcagtgcctgc
agtcgaaagctgagagggaaggctttctactatgtcggagggaaggttttctgtgaagag
gactttctgtactctggttttcaacagtctgcagacaagtgcaacgcttgtggacatctg
attatggacatgatcctgcaagccctcgggaagtcctatcaccccggctgtttccgctgc
gtcgtctgtaacgagagccttgatggagtgcccttcactgtggacactgaaaacaagatc
tactgtgtcaaagactaccacagggtcctggccccgaaatgtgcagcgtgtaatcagccc
atcctgccctcagaggggtctgatgaaaccgttcgagttgtatccatggacaaggactac
cacgtggaatgctatcactgtgaggattgcaagaaggagctgaacgacgaggagggtcac
cgctgctaccccctgaacggccacctcctctgccactcctgccacctgaagaacatcgag
cccggctgctcctctcctgtcacgacctcctccttctga
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