Hippoglossus hippoglossus (Atlantic halibut): 117777361
Help
Entry
117777361 CDS
T07778
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2D isoform X1
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04020
Calcium signaling pathway
hhip04080
Neuroactive ligand-receptor interaction
hhip04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117777361
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117777361
04082 Neuroactive ligand signaling
117777361
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hhip04040
]
117777361
Ion channels [BR:
hhip04040
]
Ligand-gated channels
Glutamate (ionotropic)
117777361
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
117777361
NCBI-ProteinID:
XP_034467959
LinkDB
All DBs
Position
16:complement(9824541..9873872)
Genome browser
AA seq
2022 aa
AA seq
DB search
MKSTYIFRYIYFPRRVCVGVCVCLRVCACVACVAVAAAVAAVAAAAAEAAAGDTRKTDTS
KRKDVKKDGGTQEERGDRLVKNKWTGLVDASPHLLLRPSPRERDAGAMMNFNIAVIHAGA
TVAAEASVSGSGGRVLYPGFGRVYGSLGESVVTQWGSANVIWLQVNDSSPKTVLSQLCEL
LAARPLQGLVYEEERPPRTAWGPLAPMLEFVSAQTGLPIVAVGGGAGLGRMPQESGSIFL
QFSSSTTLQLEVIFEVLEEYDWTAFSVVCTRHHGYQDFLSVVEGLTDGSFIGWEKKSVVI
LNVTDDPGGARTRRLLKENEAQVRLLYCSQEEAELVFKAAWAAGQAGASHMWFAVGPALS
GLGMENLPRAVFAVRPQGWRDEPRRRIARGVSVLTHGAVAMRKDYGTTGGPNFVTNCMTD
ANQTQRVRGRMRYFSNITLGGRDYSFSIDGYLSNPFLDVISWTPGRGWEDVGWWENGVLR
LRYPAWSRYGPFLKPPDDAQHLRVVTLEERPFVIVELADPASGTCIRDSVPCRRPLNASA
IHEGVAPMKQCCKGFCIDILKRLAKIVGFTYDLYLVTNGKHGKKIDGVWNGMIGEVVYKR
ADMAIGSLTINEERSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPYSPAVWVMMFVM
CLTVVAVTVFIFEFFSPVGYNRSLQNGKKAGGSTFTIGKSVWLLWAIVFNNSVPVENPRG
TTSKIMVLIWAFFAVIFLASYTANLAAFMIQEEYIDTVSGLSDKKFQHPEEQYPPLKFGT
VPNGSTEKNIRSNYPGMHQYMGKYNQRGVEDAILNLKTGKLDAFIYDAAVLNYMARKDEG
CKVMTIGSGKVFATTGYGIALHKNSRWKRPLDLALLQLVGDDEIEMLERLWLSGICHNDK
IEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWKLRHCMATSSGKLDFLLAISR
GMYSCCSFEDETAPGGAKSLPTHHHTAMVTVPSQPHVVSTSMTNPVIAMSQQQQQPQQQQ
PQTVYKTPLPGSPPTMVHSGTALGPSNTPIAGAPLPCTTFLPRPDRRLAVVDRWRLPKTA
TATNPMAVRWPVTDMGPFAQKVPPNWAPSAGGGGGLDGYKRYYGPIDPEGLGPCMEQQAG
SQTPKTMPRGHPQPPPATVAFYSEKGMDHGVGKRVVGGGSGGQGKGAVKSLGTPRVPPKS
QAPLPPTPPLPHPSPPLPSSFWRKRRPKKPKEPGGPLYENILPLGRRGAARDEVREGGGR
RARPLSPPLSLPVPVPLSPTYTPPSPSASLHYTSSTSSSTTSSTSTSSSASSSRSTSPTY
SYSSSRSTRDRTGGIDGEDDDDDEELTEESSLLLGRGRDRERSIIRPRSFSHGRLPPPIP
PRKPRTSWGDRERERERGGSQLSQLQEWWASWSERERSGTGGDSERQKREKKRRKEKEKE
KKKKKKNKKRKKREERERERERERKRRKVKKKKKKALKTKKRRKSTGGKRSEPEEGDVEA
EREGEAEGDREGEIQDYSSFSAQYRSTFGEKGRDSWEGERDRGRREGGDEGNDREEEDSG
RSRDRHPKSSRSHSRHQTPSKRYPNLHKLPASVKFWVNGRGDNSSTPPTSLHPLLPSSKR
RRSGEMERDDSGRVGERRPLLMHYEKEKAQTREGLSFQEWDSEDGNVDNDENEEERERLR
EREERRRRAGRGAVSESERDRARAEDSYSDEGSSGGFGRFERYWEGGAAATGGIGGIGGG
GWFFGTYPSREKGGSINSRDDSLIGTRAEGWFGGDFWGSGPGAGWGSEGGLGGSSSQWPP
PPTSFPPPRRYWSMDKIPVKGEKKWKSGGGKSKGRSRDRGEEAGRPTMCSCNLYPQPHPY
PHPHSRSHTSHSKRGATTLSHSQEELLPHCHSFSGVSRPKPLPPKPDQSKSGSQSNLSLS
TQPTDHPPQPSPSPPQQPSMSPSSLPMPIPPPPSTSPISPPAGVGMGGQGQAQASASAKL
QYQRLRSVPQPRRFYSPHLPLKAKSLCSRRGSAHFSSLESEV
NT seq
6069 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcacatatatatttagatatatatattttccccggcgtgtgtgtgtgggggtg
tgtgtgtgtttgcgtgtgtgtgcgtgtgtggcgtgcgtggcggtggcggcggcggtggca
gcagtagcggcggcggcggcggaggcggcggcgggggacacccgcaaaacggatacctca
aaaaggaaggatgtgaaaaaggatggagggacgcaggaagagaggggggacaggctggtg
aaaaacaagtggacaggtctggtggacgcctccccccacctcctgctccggcccagtccg
cgggagcgtgatgcaggggccatgatgaacttcaacatcgccgtgatccacgctggtgct
acagtggcggcagaggcgtcggtgtcggggtcagggggcagggtcctctaccctggtttc
ggccgggtgtacggctccctgggcgagagcgtggtcacccagtggggctctgctaatgtc
atctggctacaggtgaatgacagtagtccaaagacggtgctgtcccagctgtgtgagctg
ctggcggcgcggcccctgcagggtctggtttatgaagaggagaggccccctcgcacagcc
tggggtccattggcccccatgctggagtttgtctcggcgcaaacaggactgcccatagtg
gctgtaggagggggagcggggctggggaggatgccacaggaatcaggttccatctttctc
cagttcagctcctctactaccctccaattagaggtcatctttgaggtgctggaggagtac
gattggaccgccttttccgtggtgtgcacacgtcaccacggctaccaggatttcctgtcc
gtggtggagggcctgacggacggctcgttcatcggctgggagaagaagagtgtggtgatc
ctgaacgtgaccgacgaccctgggggggcacgcacgcgcaggctgctgaaggagaacgag
gcgcaggtacgtttgctgtactgctcccaggaggaggccgagctggtgttcaaagctgcc
tgggccgccggtcaggccggagcctcgcacatgtggtttgccgtggggccagctctctca
ggtctagggatggagaacctgccgcgggctgtgttcgccgtgcggcctcagggctggagg
gacgagccgcgccgtaggattgctcgcggtgtgtccgtgctgactcacggggcagtggcc
atgcgcaaggattacggaacaacgggtgggccaaactttgtcaccaactgcatgacggat
gccaatcagactcagagagtgcggggcaggatgaggtatttcagcaacatcacacttggc
ggtcgagactactccttcagcattgatggttacctgtcgaaccccttcctggatgtcatt
tcctggacacctggacggggatgggaagatgtaggctggtgggagaatggcgtgctgagg
ctccgatacccggcctggtcccgctacgggccgttccttaaaccacctgatgatgcccag
cacctgcgtgttgtcactctggaggaaaggccatttgtcatcgtggagctggcggaccct
gcgtcggggacctgcatccgtgactcagtgccctgcagacgacccctcaatgccagtgcc
atccatgagggcgtggctcccatgaagcagtgctgcaaaggcttctgcattgacatcctc
aagagactggccaagattgttggcttcacctatgacctttacctagtgaccaatgggaaa
catgggaagaaaattgatggagtttggaacggcatgattggagaggtggtttacaagcga
gcggacatggctattggctcgctgactatcaatgaggagcggtcggaggttgtggatttt
tcagtcccttttgtggagacggggatcagtgtcatggtctcccgtagcaacggaaccgta
tcaccatcagctttcttagagccctacagcccagcagtgtgggtgatgatgttcgtcatg
tgcctgactgtggtcgctgtgacagtctttatttttgagttcttcagccctgtgggctac
aaccgcagtctccagaatggcaagaaggctggagggtctactttcactatagggaagtcc
gtatggcttttatgggccattgtcttcaacaactctgtgccggtggagaaccccagagga
accaccagcaagatcatggtgctgatctgggccttctttgccgtcatctttctggcctcc
tacactgctaacctggccgctttcatgatccaggaggagtacattgacactgtgtcaggc
ctctcggacaagaagtttcagcatcccgaggagcagtacccacctctcaagtttggcacg
gtgcccaacggaagcacggaaaagaatatccgctccaactacccaggcatgcaccagtac
atgggcaaatacaaccagagaggagtggaggatgccatactcaacctaaagactgggaaa
ctggatgcttttatttatgatgctgcagtattgaactatatggccaggaaggacgaaggt
tgtaaggtgatgaccataggctcggggaaggtttttgccaccacaggctacggtatcgcc
ctgcacaaaaactcacgctggaaacgtcctcttgacctggccctgctgcagctggtggga
gatgatgagattgagatgctggagcgcctctggctctctggtatttgccataatgacaaa
attgaggtgatgagcagtaaactggatattgacaacatggccggggtcttctacatgctg
ctggtggccatgggcctgagtctgctggtgtttgcctgggaacacttggtctactggaag
ctgcgccactgcatggccaccagttctggcaaattggactttctccttgcgatcagcagg
ggcatgtatagctgttgcagctttgaggatgaaacagcaccaggtggagcaaaatctttg
cccactcatcaccatacagcaatggtgacagtcccatcccagccacatgttgtctcaacg
tctatgaccaacccagttattgccatgtcgcaacagcagcaacaaccgcaacagcagcaa
ccacagactgtctacaaaacacctctaccaggctcacctcccaccatggtgcattctggg
acagcactgggcccctccaatacccccattgccggcgcacccctcccttgcaccaccttt
ctgcctcggccagatcgcagactggctgtggtggatcgctggagactgccgaaaacggct
acagctaccaaccctatggctgtaaggtggcccgtcactgacatgggaccctttgctcag
aaagtcccaccaaactgggctccaagtgctggagggggtgggggactcgatggttataag
agatactatggtcccattgaccctgagggactggggccctgcatggagcagcaggcaggg
tcccagacccccaagactatgcccaggggccacccccagccacctccagccactgtggct
ttctactcagaaaagggcatggaccatggggtggggaagagggtggtgggaggtggcagc
ggaggtcaggggaaaggggccgttaaatctctgggcactcccagagtgcctcctaagagt
caggcccctctgcctcctacacccccactgccacacccctctccccctctcccctcatcc
ttctggaggaaacgcagacccaaaaagcccaaagagcctggagggccactgtatgagaac
attctgcccctggggcggaggggagcagcacgagatgaagtgagggagggaggagggaga
agggcacgcccgctctctcccccgctctcacttccagtgccagtacccctcagccccacc
tatacacctccttctccgtctgcgtccttgcactatacgtcctcgacctcttcgtcgacc
acttcatccacatccacatcctcatctgcctcatcttctcgctccacctctcccacctac
tcttacagctcctccaggagcacacgagacaggactggaggaatagatggagaggatgat
gatgacgatgaggagctgacagaagagtcaagcctcctcctcggtagggggagggacagg
gagcgctcaatcatccggcctcgttccttcagccacgggcgcctgccaccacccataccc
cccagaaaaccacgaacatcctggggtgacagagagagagaaagggagagaggggggagt
caactatctcaactccaagagtggtgggcaagctggagtgaaagagagaggagtggaacg
ggcggcgattctgagaggcaaaaaagggaaaagaaaaggaggaaagagaaggagaaagag
aagaagaagaagaaaaagaacaaaaagaggaaaaagagggaagaaagggaaagagagcga
gagagagaaaggaagcggcgaaaggtgaaaaagaagaaaaagaaggcactgaagacaaag
aaaaggaggaaatcaactggggggaaacgatctgagccagaggagggagatgtagaggca
gagagggaaggagaggcagaaggagacagggaaggagaaattcaagactactcctccttc
tctgctcagtataggagcacatttggggagaaagggagagattcctgggaaggagagaga
gacagaggaaggagagagggaggagatgagggcaatgacagggaagaggaggacagtggt
agaagcagggacagacatcccaaatcctcacgctcccattccagacatcaaaccccaagc
aagcgctatcctaaccttcacaaactccctgcatcagtcaaattttgggtgaatggaaga
ggagataactctagtactccaccaacatccctccatccgctacttccatcctcaaagcgg
agaagaagtggagaaatggaaagagacgatagcggtcgagttggagagcggcgtcctttg
ttaatgcattatgaaaaagagaaagcacagacaagagaagggctatccttccaagagtgg
gactctgaagatggcaatgttgataatgatgagaatgaggaggagagggagagactgagg
gagcgtgaggaaaggagaaggagagcaggtaggggggcggtgtccgagtcagagagggac
agagccagggcagaggacagttactcagatgaaggctcgtcaggggggtttggtcgtttc
gaaagatattgggagggaggtgcagcggcaactggtggaataggaggaataggtggagga
ggctggttctttggcacctacccctccagagagaaagggggcagtatcaacagtcgggat
gattccttaataggaactcgggcagagggatggtttggtggggatttctggggttcaggg
ccaggtgcaggttggggatcagagggagggctaggggggtcaagctcacagtggccgcca
cccccaacgtcctttcctcctcctagacgatactggtcaatggataagatccctgtgaag
ggagagaaaaaatggaagagtggaggagggaagagcaaggggagatctagggacagaggt
gaagaagcagggcgacccaccatgtgttcctgtaacctttatccccagccccatccttac
ccacatccccacagtcgctcacacacctcccactccaaaagaggagccacaaccctttcc
catagccaggaagagcttctcccccactgccacagcttcagcggagtctctcgccccaag
cctctgcctcccaaaccagatcagtccaaatccggcagccaatctaacctcagcctcagc
acacagcccacagaccatccgcctcagccttcaccgtcgccaccccagcagccgtccatg
tctccctcctctctcccgatgcccatcccgcctccgccctccacatcccccatctcgcca
cctgctggggtagggatggggggccagggacaggctcaggcttcggccagtgccaaactc
caatatcagagactgcgctcggtgccacaaccgcggaggttctactccccccacctgcct
ctcaaagccaagagcctgtgctcgcgccgagggtcggcccatttctccagcctggagagt
gaggtatga
DBGET
integrated database retrieval system
