Hippoglossus hippoglossus (Atlantic halibut): 117777407
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Entry
117777407 CDS
T07778
Name
(RefSeq) protein argonaute-3 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117777407
03036 Chromosome and associated proteins [BR:
hhip03036
]
117777407
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117777407
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
117777407
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
117777407
microRNA pathway
RISC loading complex
117777407
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoMid
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
117777407
NCBI-ProteinID:
XP_034468065
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Position
16:complement(5712358..5746693)
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AA seq
880 aa
AA seq
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MEIGTTGAVGAQSLFTMPRRPGYGTMGKPIKLLANCFQVEIPKMDVYLYEVDIKPDKCPR
RVNREVVDSMVQHFKVTIFGDRRPVYDGKRSLYTANPLPVAPAGVDLDVTLPGEGGKDRP
FKVSIKFVSLVSWHMLHEVLTGRSMPEPLELDKPISTNPVHAVDVVLRHLPSMKYTPVGR
SFFSAPEGYDHPLGGGREVWFGFHQSVRPAMWKMMLNIDVSATAFYKAQPVIQFMCEVLD
IHNIDEQPRPLTDSHRVKFTKEIKGLKVEVTHCGTMRRKYRVCNVTRRPASHQTFPLQLE
NGQTVERTVAQYFREKYNLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDN
QTSTMIKATARSAPDRQEEISRLVRSANYEADPFVQEFQFKVRDEMAHVTGRVLPAPMLQ
YGGRVSTEHFMSDRGAGDVSDYKSNRTVATPSHGVWDMRGKQFHTGVEIKMWAIACFATQ
RQCREEILKGFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYAGLQLII
VILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVVKTSPQTLSNLCLKINVKLGGINNILV
PHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHPSRYCATVRVQRPRQEVI
QDLASMVRELLIQFYKSTRYKPTRIIFYRDGVSEGQFRQVLYYELLAIREACISLEKEYQ
PGITYIVVQKRHHTRLFCADRNERVGRSGNIPAGTTVDTDITHPYEFDFYLCSHAGIQGT
SRPSHYHVLWDDNCFTADEFQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVD
KEHDSAEGSHVSGQSNGRDPQALAKAVQIHHDTLRTMYFA
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcggaactacaggagccgttggggcccagtccctgttcaccatgcctcggcgg
cctggctatggcaccatggggaagcccatcaagctgctggccaactgcttccaggtggag
atccccaagatggatgtctacctctacgaggtggacatcaagcctgacaagtgtccacgg
cgggtcaacagggaggtggtcgactcgatggtgcagcacttcaaggtgaccatctttggg
gatcgcaggccagtgtacgatggaaagaggagcctgtacacagccaaccctctacctgtg
gcacctgcaggggtggacctggatgtcactctaccaggtgagggagggaaagatcgtccc
ttcaaggtgtccatcaagtttgtgtctctggtcagctggcacatgctccatgaggtgctg
accggccgcagcatgcctgagcctctcgagctggacaaacccatcagcaccaaccctgtc
catgcagtggacgtggtcctgcgacacctgccatccatgaagtatactccagtgggtcga
tccttcttctcggctccggagggctatgaccatcccctgggaggcgggagggaggtttgg
tttggcttccatcaatctgtgcggcccgccatgtggaagatgatgctcaacatcgacgtt
tctgccactgccttctacaaggcccagcctgtcatccagttcatgtgtgaagtgctggac
atccacaacatagacgagcagccccgccctctcaccgactcgcaccgggtcaaattcacc
aaagaaatcaaaggtttgaaggtggaggtgacacactgtggaaccatgcggaggaagtac
cgcgtctgcaacgtgacccgtcggcctgcgagccatcaaacgttccctctgcagttggaa
aacggtcagacggtggagcgtaccgtagcccagtacttcagagagaagtacaacctgcag
ctcaagtacccgcatttaccctgtctacaagtgggccaggagcagaagcacacctacctg
cccctggaggtgtgtaacattgtagctggtcagcgatgcatcaagaagctgacggataac
cagacctccactatgatcaaagccacagctcgctccgcacccgaccgacaagaggagatc
agcaggctggtgcgcagtgccaactacgaggccgaccccttcgtgcaggagttccagttc
aaagtgcgcgacgagatggcccacgtgacggggcgagtgctacccgcccccatgctgcaa
tacggcggcagggtgagcacagagcactttatgagtgatcgtggtgccggtgatgtctca
gactataagagtaaccgcaccgtagccacgcccagccacggggtgtgggacatgagaggg
aagcagttccacaccggggtggagatcaagatgtgggccatcgcctgctttgccacacag
aggcagtgtcgggaagaaatcctgaagggtttcacggaccagctacgtaaaatctcgaag
gatgccgggatgccaatccaaggtcagccatgtttctgtaaatacgcccagggagcggac
agcgtggagcccatgttcagacacctgaagaacacgtacgccgggttgcagctcatcatc
gtcattctgccgggaaagactcctgtctacgcggaggtgaagcgagtgggagacaccctc
ctcggcatggccactcagtgtgttcaggtgaagaacgtggtgaagacgtctcctcagacc
ctctccaacctctgcctcaagatcaacgtgaagctgggaggcatcaacaacatcctggtg
cctcatcaacgaccgtcagtgtttcagcagccagttatcttcttgggagcagatgttaca
catccacctgcgggagacgggaagaagccttcgattgcagcagtggttggcagtatggac
gctcaccccagcaggtactgtgccacagtacgggtccagaggcccaggcaagaggtcatc
caggacctggcctccatggtgcgggagctgctcatccagttctacaagtcaactcgctac
aagcccaccaggatcattttctacagggacggagtttcagaaggccagttcagacaggtg
ctgtattatgagctgctggccattcgtgaggcctgtatcagcctggagaaggagtaccag
ccaggcatcacctacattgttgtacaaaaacgccaccatacccgcctcttctgtgccgac
cgcaacgaaagagttggacgtagtggaaacattcccgctggtactaccgtggatacggac
atcacccatccgtacgagtttgacttttacctctgcagtcacgctggaatacagggcacc
agtcgtccctcccactaccatgtactgtgggatgacaattgttttaccgctgatgagttc
cagctgctcacctaccagttgtgccacacctacgtgcgctgtacccgctcagtctccatc
cctgcgccagcctactacgcccacctggtggccttccgtgcccgctaccatctggtggac
aaagaacatgacagcgccgagggcagccacgtgtctggtcagagtaacggtcgggacccc
caggcgctggccaaagctgttcagattcaccacgacaccctgaggaccatgtacttcgcc
tga
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