Hippoglossus hippoglossus (Atlantic halibut): 117777497
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Entry
117777497 CDS
T07778
Symbol
col28a1b
Name
(RefSeq) collagen, type XXVIII, alpha 1b
KO
K23619
collagen type XXVIII alpha
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hhip01002
]
117777497 (col28a1b)
Peptidases and inhibitors [BR:
hhip01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
117777497 (col28a1b)
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Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_3
DUF1194
Motif
Other DBs
NCBI-GeneID:
117777497
NCBI-ProteinID:
XP_034468200
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Position
16:3299772..3314881
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AA seq
1196 aa
AA seq
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MLLRANLRRGAGLCLLLLTLVHEATSQRQKSGRRSNYRLHNDEGGHGPCSLEVVFIVDSS
ESAKTVLFQRQKKFVLSFSTQLSTLQVAGWKLQVRMAALQYSSSVSVEQRFSAWKDLDSF
HGQVSAMSYIGHGTYTTYAITNASQLLVQETPADSVRVAVLMTDGVDHPRNPDVIAAAAE
AKGHGIRFFAVGLSNIAQQSPNSAKLRAMASAPAQQFVQSLLDAQLEETLLREMAAVASE
GCPQAQVCLCERGERGPPGSAGRKGDPGLRGSSGVQGARGESGLNGRPGSDGIEGLPGHK
GNKGERGDCGTPGTKGDAGPEGLAGPRGSHGEQGSLGPAGDSGPEGPAGPKGDRGFVGAA
GAPGERGIGFPGAKGEKGNDGRPGPTGLVGIGEPGLPGPQGPSGALGNPGPPGEGFTGPK
GDRGYQGPRGIRGLPGAGVKGDMGSRGPPGISGPLGAPGSGPQGDKGDQGPVGPSGLRGA
PGIGITGPKGIQGVTGEPGLPGERGVGQPGPKGDPGAEGVAGIPGQPGEDGTLGKKGDLG
LPGLRGPDGAPGKGAPGGKGDRGDRGSRGLSGAVGPVGPMGPKGEPGIIGRVGSTGAPGR
GIPGAKGEPGPQGPAGALGGPGIGLTGPKGDRGTPGPAGSPGPKSEGVPGPPGLPGSPGL
MGEAGPEGVGLPGPKGDRGLPGPSGPAGLPGIGLIGPKGSVGQMGQTGPQGLTGEGIQGQ
KGEPGFQGVPGPRGPTGLGVQGSKGDRGLRGEKGRGGDRGKAGEPGTIGSLGRAGQKGEA
GLTREEVVRIVRSICSCGVTCRQTPLELVFVIDSSESVGPDNFNVIKDFVNALIDRASVS
RDTTRVGVVLYSHINMVVVSLEQVASPDQVKSAVRSMTYMGEGTFTGSAIHQANQVFRGA
RAGVRKVAIVITDGQADKRDSVQLERAVAEARASNIETFVVGVVNQSDPLYEEFKKELNL
MASDPDSDHVYLIEEFKTLPALEKKLLSRICEDGERHLFSSIPSSGNPPGVPETSGNVRE
PPYRTDTDTPTFTGDSRRVQMVPGAPGSPLDREAASPQRPKPDTRAPTDTQRFPFFDWEP
FRPVTELLPRFEGKKPSTHTETNGAAGPAGPTVTAPPEERTPLPSPQPPPLVTSDTGVSA
ERCIQVLDPGPCRDYVVRWYYDANGNSCAQFWFGGCQGNSNQFENERSCKETCVKV
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgagggcaaacctgaggagaggagcggggctttgcctcctgctgctgacgctc
gtacacgaggccacgagccagagacaaaagtcaggacgcaggagcaactacaggctgcac
aatgacgagggaggacatggtccctgctccctggaggtggtcttcatcgtggacagctct
gagagtgcgaagaccgtcctgttccagaggcagaagaagttcgtcctgagcttcagcacg
cagctctccacgctgcaggtggccggctggaagctgcaggtgcggatggccgcgctccag
tacagcagctccgtgtccgtcgagcagcgcttctccgcctggaaagacctggactcgttc
cacggtcaggtcagcgccatgagctacatcggccacggcacctacaccacctacgccatc
accaacgcctcgcagctgctggtgcaggagacgccggcggacagcgtgagggtcgcggtg
ctgatgacggacggggtcgaccatccccgcaaccctgacgtgatcgcagctgcggccgag
gccaaaggtcacggcatcaggttcttcgccgtgggcttgtcgaacatcgcccagcagagt
ccgaacagcgccaagctccgggccatggccagcgccccggcccagcagttcgtccagagc
ctcctggacgctcagctggaggagacgctgctcagggagatggctgcagtcgcatcagaa
ggatgtccacaagcccaggtgtgtttgtgtgagagaggagagaggggccctcctggaagt
gcgggtagaaaaggagaccccggcctcaggggttcatccggcgtccaaggagcgaggggg
gagtccggactgaacggtcgaccaggaagtgacggcatagagggtctcccagggcacaag
ggcaataagggcgagagaggagactgtggcactccagggacaaagggtgacgctggaccc
gagggacttgcaggcccacgaggctcacatggagaacagggttcgctgggaccagcagga
gactcaggtcctgagggaccagcgggacctaaaggagacagaggattcgtgggagctgct
ggggcaccgggggaaagagggatcggattcccaggagccaagggtgaaaaaggaaacgat
ggaagaccaggtcctacaggtcttgtggggatcggagaaccaggactaccaggtcctcaa
ggaccatctggagcactaggaaaccctggaccacctggagaggggttcacaggaccaaag
ggggatcgaggatatcagggtcccagaggcatccgtgggcttcctggagctggggtcaaa
ggtgacatgggcagccgcggacctcctgggatttcgggtccactcggggctcctggttca
ggacctcaaggagataagggggatcaaggcccagttggaccctcaggactcagaggagct
ccaggtattggaataacaggacctaaggggattcagggagtgacgggtgaacctggtctg
ccgggcgagagaggagtgggacaaccaggaccgaagggcgacccgggggctgagggggtg
gcaggtataccaggtcaaccaggagaggatggaaccctgggaaaaaagggtgacctcggg
ctaccgggcctcaggggacctgacggggctccgggtaaaggggctcctggaggcaaggga
gacagaggggaccgggggagcagaggcctgtcaggtgcagtcgggcccgtggggccgatg
gggccaaagggggaaccaggaataattgggcgagtgggttcgactggagctccagggcga
gggatacctggagccaagggagaaccgggtccacagggtccagccggagctttgggagga
ccagggatcggtttaactggacctaagggcgacagaggaacaccaggacctgctggttcc
ccaggaccaaagagtgaaggcgtccctggtcctccaggacttccggggtctcctgggttg
atgggagaggccggaccagagggagttggtttaccaggaccaaagggggacagaggactg
ccgggaccctctggacctgcagggcttccaggaatcggtctgattggtcctaagggttca
gtcggtcaaatgggacaaacaggtccacaggggttaactggagagggcattcaaggacaa
aagggggagcctggatttcagggggtccccggccccagaggccctactggactaggtgtg
caggggagcaagggggaccgaggcctccgaggtgagaagggcagagggggggacagagga
aaagccggagaaccaggaaccatcggatctttgggccgagcgggacagaagggagaagct
ggacttacaagggaagaagtcgtcagaatagtgagatccatctgcagttgtggagtgacc
tgccgtcaaacccccttggagctggtctttgtgattgacagctcagagagcgtcggcccc
gacaacttcaacgtgattaaagacttcgtgaacgccctgatcgaccgggcctcggtcagc
cgagacaccacgcgggtcggcgtggtcctctacagccacatcaacatggtggtggtcagc
ctggagcaggtggccagccccgaccaggtcaagtccgcggtgcgctcaatgacctacatg
ggcgagggcaccttcaccggcagcgccatccatcaggccaaccaggtgttcaggggggcg
cgggcaggcgtgaggaaggtggccatcgtcatcacagacggtcaggccgataagagggac
tcggtccagctggagagggccgtggcagaagctcgggcgagtaacatcgagacgtttgtg
gtcggggtggtgaaccagagcgaccctctctacgaggagttcaagaaggagctcaacctc
atggcctccgaccccgacagcgaccacgtgtacctgatcgaagaattcaaaactctgcca
gctcttgagaagaaactgctgagtcgtatctgtgaagacggagagagacatttgttcagc
tccatcccgagctccggaaatcctccgggagtccctgagacgtccggtaacgtccgggag
cccccgtacaggacggacacggacacgcccaccttcacaggagactccaggagggttcag
atggtgcccggcgctccaggctctccgctcgacagagaagccgcctctccgcagagaccc
aagccggacaccagagcccccacagacacccagaggtttccgttcttcgactgggagcct
ttcagaccagtgacagagctcctccctcggtttgaggggaagaaaccctcaacccacacg
gagacgaacggagccgccgggccagccggtcccactgtgacggccccgcccgaggagagg
acgccactgccgtcaccacagcctcccccgctggtgacctccgacacaggcgtatctgcg
gagcggtgcatccaggtcctggacccgggcccgtgtcgagactacgtggtcaggtggtac
tacgacgccaacggcaattcctgcgcccagttctggttcggaggttgtcagggaaacagc
aaccagtttgagaacgagaggagctgcaaagaaacctgcgtcaaggtctaa
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