Hippoglossus hippoglossus (Atlantic halibut): 117777506
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Entry
117777506 CDS
T07778
Symbol
itga8
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-8
KO
K06584
integrin alpha 8
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04510
Focal adhesion
hhip04512
ECM-receptor interaction
hhip04514
Cell adhesion molecule (CAM) interaction
hhip04810
Regulation of actin cytoskeleton
hhip04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117777506 (itga8)
04514 Cell adhesion molecule (CAM) interaction
117777506 (itga8)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117777506 (itga8)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117777506 (itga8)
04810 Regulation of actin cytoskeleton
117777506 (itga8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hhip04515
]
117777506 (itga8)
Cell adhesion molecules [BR:
hhip04515
]
Integrins
Integrin alpha subunits
117777506 (itga8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
ITGAX-like_Ig_3
Motif
Other DBs
NCBI-GeneID:
117777506
NCBI-ProteinID:
XP_034468227
LinkDB
All DBs
Position
16:13612280..13650749
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AA seq
1055 aa
AA seq
DB search
MERARDCGSSAGMLVLGVLLVLRPALDGVWGFNLHAEHPTVYRGPGGSYFGYSVDFYQDS
ADSNTISVLVGAPKANTSQPGIVEAGAVYYCPWPGLPDSCRQIPFDSSNNRMMKVNGTRE
PVEFKSHQWFGASVRTHKGKVVACAPLYHWRTVKLSGEKEPVGTCYVAVQNFSAYAEYSP
CRTSDPDPEGQGFCQAGFSVDFTKEGKLVVGGPGSFYWQGQVMTAGIAEILNGYSLKAIL
RKVPGEKYTRAAEDTHDDSYLGYSVAVGEFTGDSEQELIAGVPRGAQNFGYVVMINSTNL
TFIQNFTGEQMASYFGYSVAVTDLNGDGMDDVLVGAPLYMEREMESKPREVGRVYLYLQM
APLTFSNPVALTGTHTFGRFGSAIAPLGDINQDGYNDVAVGCPFGGEDRGGRVLIFNGNR
DVSTQGLVLSQELRAAWTPSGSLSGFGFTVRGGQDLDNNQYPDLIVGAFGSGEVSVYRSR
AVVSVEAALNLTPRILNPDDRQCHLPETDIMVTCLKVDVCAAVSGVGIPSSVDLRAELQL
DWLKGSRGGVKRVLFLETQQPQHRGILTLGRSRPRACLSYTIYLKEDEEFRDKLTPISLA
LNYSLAPPPPGQNLPPVLNHYSSTFLQEHAYILLDCGDDNICIPDLQLSASIDHSELVIG
DDNLVMLTITAVNRGEGAYETELHTLIPPEADYIGVERRVESLSQLNCEYKMVNDSRMVV
CDLGNPMVAETELSVGLRFAVQRLDDAGPKISFELQIHSSNKDNSNSNPVSLNLSIVAQA
QLDLRGVSHPSQVVLPFPRWEPKEKPVKEEEVGPQVTHIYELHNSGPSSIREAELQVGWP
SRFREENLLYAMEIQTDGPISCRTNTSLNPLGLQISALQDTPELLGFLRNTSSPPTRHKR
AVSTDQSYSGKTLNCTNISCLRITCVVGRLDRGQSAVVKIRSRLWAHTFLQRRNDHTFLN
STVSFMVTAMPYRIQPRSLPQHSTSMGTLVLWGTPDVSFAVPLWXIILAILXGLLVLAML
TLAMWKCGFFDRARPPTDDNVSDQERLTSDQTGDA
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcgcacgggactgtggctcctccgctgggatgttagttctcggggtgctgctg
gtgctccggcccgcgctggacggagtctgggggttcaaccttcacgcagagcatcccacg
gtttacaggggacccggtggaagttatttcggttactcagtggacttctaccaagactcc
gccgacagcaacacgatcagtgtgttggtgggggcccctaaggcgaacacctcccagcct
ggcatcgtggaggctggagctgtctactactgcccctggcctggactgcctgacagctgc
aggcagataccgtttgacagttccaataacagaatgatgaaggtgaatggcaccagggag
cctgtggaattcaagtcacaccagtggtttggagcgtctgtcaggacacacaaaggaaaa
gtggtggcctgtgctccgctctaccactggcgcacagtgaagctgagtggggagaaggaa
cctgtggggacttgctatgtggccgtgcagaacttcagcgcctacgcagagtactctccg
tgcaggaccagcgatccagacccagaggggcaggggttctgccaggctggcttcagtgtg
gatttcaccaaggaaggaaagctggtggtgggaggacctggaagcttttactggcaaggt
caagtgatgacagcagggatagctgagatactgaacggttactctttgaaggcaatcctg
agaaaggttccaggagagaaatacactcgagcggctgaggacacacatgatgacagctac
ctcggttactctgtggcggtgggggagtttacgggagactctgaacaagagctgatagct
ggagtcccgagaggagcacagaactttggatatgtggtaatgatcaactccaccaatctg
accttcatccagaacttcacaggcgaacagatggcctcgtattttggctactcggtggct
gtcaccgacctgaatggagatgggatggacgacgtgctggtcggggcgcccctctacatg
gagagagagatggagagcaaacccagggaggtgggcagggtttacttgtacctgcagatg
gcaccgctcacattctccaatcccgtcgccctcaccggcacgcacaccttcggacgcttt
ggctcggctatagcaccgctgggagacatcaaccaagatgggtacaatgacgtggcggtg
ggctgtccattcggaggcgaggaccgtggaggcagagtattgatcttcaacggtaacagg
gacgtatccacacaaggcttggtgctgagccaagagctaagagcagcctggaccccaagt
ggcagcttgtcgggatttggattcactgtgagaggaggccaagacctggacaacaatcag
tatcctgatctgatcgtgggggcatttggctcaggcgaggtgtcggtgtacagatcccga
gctgtggtgtctgtggaagctgcactgaacctgacacccagaatcctgaaccctgacgac
cgacagtgtcacctgcctgagacagacatcatggtcacctgtctgaaggtggatgtgtgt
gcagcagtgagcggtgtggggatccccagctctgtggacctgagagcggagctgcagctg
gactggttgaaaggcagcagagggggagtaaagcgagttctcttcctggaaacccagcag
cctcagcacagggggatcctaacgctgggtcgtagccgcccacgtgcatgcctgagctac
accatttacctgaaagaggacgaagagttcagggacaagttaacacccatctcactggct
ctgaactacagcctcgctcctcccccaccgggacaaaacctcccacctgtccttaaccac
tacagcagcactttcctccaagagcatgcctacattctcctggactgcggagacgacaat
atttgtatccccgacctgcagctctctgccagcatagaccattcagagctggtgattgga
gatgacaatctggtcatgttgaccatcactgcggtgaaccgaggagagggagcctacgag
acagagctacacacactgataccaccagaggctgactacatcggagtggagcgcagggtg
gagtctctgtctcagctgaactgcgagtacaagatggtcaatgattccaggatggtggtg
tgtgacctcgggaacccaatggtagccgagactgagctgtctgttggtttgaggtttgct
gtgcaaaggctggacgatgccggaccgaaaatcagctttgagctacagatccacagctcc
aacaaagataactccaacagcaacccagtcagtttgaatctgtccatcgttgcccaagct
caactggatttacgtggggtgtctcacccctctcaggtggtgctgccattcccgcgctgg
gaacccaaagagaagcctgtcaaagaggaggaagtgggaccacaagtaactcacatctat
gagctccacaactctggtcccagcagtatccgagaggccgagcttcaagtcggctggccg
tcccgtttccgtgaagagaacctgctgtatgccatggagattcaaactgacggaccaatt
agctgccggacgaacaccagcctcaaccctctcggccttcagatctccgctctccaggac
acacctgagttattgggtttcctgaggaacaccagttctcctccaacccgccacaaacga
gccgtcagcacagatcagagttacagcggcaaaaccttgaactgcactaatatctcctgt
ctgaggatcacatgtgtggtcggccggttggaccgcgggcagagcgcggtggttaagatc
cgctcgagactctgggcacatacgttcttgcagcggcgtaatgaccatacgttcctcaac
tccactgtgtccttcatggtcacagccatgccttatcggatccaaccccgcagcctgcct
cagcacagcacctcgatggggaccctggtgttgtgggggactcctgatgtctcgtttgct
gttcccctctggntcatcatcctggccatactgnctgggctgctggtgctggccatgcta
acgctcgccatgtggaagtgtggtttctttgaccgggcgcggccgccaactgacgacaac
gtctctgaccaggagcggctgacgtcggatcaaacaggggacgcctaa
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