Hippoglossus hippoglossus (Atlantic halibut): 117777670
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Entry
117777670 CDS
T07778
Symbol
fubp1
Name
(RefSeq) far upstream element-binding protein 1 isoform X1
KO
K13210
far upstream element-binding protein
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117777670 (fubp1)
03041 Spliceosome [BR:
hhip03041
]
117777670 (fubp1)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
117777670 (fubp1)
Spliceosome [BR:
hhip03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117777670 (fubp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
Secretin_N
Motif
Other DBs
NCBI-GeneID:
117777670
NCBI-ProteinID:
XP_034468386
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All DBs
Position
17:20406374..20418861
Genome browser
AA seq
705 aa
AA seq
DB search
MADYSNVAPPSSNSGGGMNDAFKDALQRARQVGRPIAAKIGGDGVAAPPSNEFGYGGQKR
PLEDAGGYFPMPNLNIDQPETKKVATSDAFSGMGGMGGAPRSLSEEFKVPDGMVGFIIGR
GGEQISRLQQESGCKIQIAPDSGGMPDRSVTLTGPPEAIQGAKRLLSEIVEKGRPAPAFH
HNDGPGMTVQEIMVPASKAGLVIGKGGETIKSLQERAGVKMVMIQDGPQNTGADKPLRIS
GEPFKVQQAKEMVMELIRDQGFREQRGEYGSRIGGGGGGGGGGGGGGGGGNGGGGGGGDS
LDVPVPRFAVGIVIGRNGEMIKKIQNDTGVRIQFKPDDGSTPDRIAQIMGPPDQAQHAAE
IISDLLRSVQAGGPPGHGGGGGGGGGGGGRGRGRGQGNWNMGPPGGLQEFTFTVPTMKTG
LIIGKGGETIKGISQQSGARIELQRNPPPNADPNIKMFTVRGSPQQIDYARQLVEEKIGG
PVTPMGGPHGPPGPHGGPGPHGPPGPPGPPGAPMGPYNPGPYNQGPPGPHGPPAPYQPQG
WGNGYPHWQQGQPDPNVSGPDKAAADANAAAWAAYYAQYGQQPQTPMTPTSGAPGTTQTN
GQGDPQAAGQSGQADYSKAWEEYYKKTGQQSQQPQDYTKAWEEYYKKQGQAAPQATAAAA
ASQPGGQPDYSAAWAEYYRQQAAYYGTTSPQAMGAAPQAPQVHPR
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggctgactacagcaacgtggctcccccgtcctctaactccggtggcgggatgaacgac
gcttttaaagatgctctgcagcgagcacgacaggtaggaagacccatcgcagcgaagatc
ggaggcgatggcgtcgcggctcctccatcaaatgagtttggctacggaggccagaaaagg
cccctggaggacgctggtgggtattttcccatgcctaacctgaatatcgaccagccagag
acgaagaaagtggctacaagtgatgccttttcaggaatgggaggaatgggtggtgcccca
aggtcattgtcagaagagttcaaggtcccagatggaatggtcggcttcatcattggaaga
gggggcgaacaaatatcacgtctgcagcaggaatctggctgtaaaatacagattgcccct
gacagcggtggcatgccagacaggtcggtgacgttaacgggaccaccagaagcaatccag
ggtgcaaagagactactatcagagattgttgagaagggacgtccagctccagcgttccat
cacaacgacggtccgggaatgactgttcaggagatcatggtccctgcctctaaagccgga
cttgtcattggaaagggtggagaaaccatcaaaagccttcaggaacgagccggggtgaag
atggtcatgatccaagatggaccccaaaacacaggcgcagacaagccacttcgaatttca
ggagagccctttaaagttcagcaagccaaagaaatggtcatggagctgatcagagaccag
ggcttcagagagcagaggggcgagtatggttcgagaattggaggaggtggaggaggcggc
ggtggtggaggaggtggtggcggcggcggcaatggaggaggaggcggaggaggagatagc
ttggacgtccccgtcccccggtttgctgtgggtatcgtcattggcagaaatggagagatg
atcaagaagatacagaatgacacgggcgtccggattcagtttaaaccagatgacggcagc
acaccagacagaatagcacagatcatgggcccccctgaccaggctcaacacgcagcagag
atcatatctgacctgctgaggagtgttcaggctggaggacccccaggacatggtggtggt
ggcggcggaggaggcggcggcggcggcagagggcgtggccgtgggcagggcaactggaac
atggggccccctggtggcctacaggagtttaccttcacggtcccaactatgaagacaggc
ctcatcattggaaaaggtggtgagacaatcaagggcatcagccaacagtccggagccagg
attgagctacagaggaatcctccacccaacgctgatcccaacatcaaaatgttcacagtc
agaggctccccccaacagatcgactacgccaggcagctggtggaggagaaaatcggagga
ccagtcacaccaatgggcggcccacatggtccccctggtccacatggaggcccaggccca
catggtcctcctgggccacctggacctcccggggctcccatgggtccatacaaccctgga
ccatataaccagggacctccagggccacatggtcctcccgcaccttaccagcctcaggga
tggggcaatggctacccacactggcagcagggacaacctgatccaaacgtttctggtcca
gataaagcagcagctgatgccaacgcagcagcgtgggcagcctactacgctcagtacgga
caacagccacagacgcccatgaccccaacaagtggcgctcccggcacaactcaaacaaac
ggccaaggtgacccacaggctgcaggtcagagtggacaggcagattactccaaggcctgg
gaggaatattacaagaaaactggtcaacagagtcaacaacctcaggactacacgaaagcc
tgggaggaatattacaagaagcaaggtcaagcggcccctcaggccactgcagcagcggca
gcctcccagcctggaggccagcctgactacagcgctgcctgggcggagtactaccggcag
caggctgcgtactatggtacaacgagccctcaggcgatgggtgcagcaccacaagcccct
caggtacacccccgataa
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