Hippoglossus hippoglossus (Atlantic halibut): 117777704
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Entry
117777704 CDS
T07778
Symbol
mib1
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase mib1
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117777704 (mib1)
Enzymes [BR:
hhip01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117777704 (mib1)
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117777704 (mib1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_5
Ank
SH3_15
MIB_HERC2
Ank_4
Ank_3
zf-C3HC4_3
ZZ
Ank_KRIT1
zf-C3HC4_2
CDC45
Prok-RING_4
Nop14
TFB6
Motif
Other DBs
NCBI-GeneID:
117777704
NCBI-ProteinID:
XP_034468475
LinkDB
All DBs
Position
17:16961955..17014683
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AA seq
1067 aa
AA seq
DB search
MTTGRNNRAMMEGVGARVVRGPDWKWGKQDGGEGHVGTVRSFESPEEVVVVWDNGTAANY
RCSGAYDVRILDSAPTGIKHDGTMCDTCRQQPIIGIRWKCAECTNYDLCTTCYHGDKHHL
RHRFYRITTPGSERVLLESRRKSKKITARGIFTGGRVVRGVDWQWEDQDGGNGRRGKVTE
IQDWSAASPHSAAYVLWDNGAKNLYRVGFEGMSDLKCVQDAKGGSFYRDHCPVLGEQNGN
RNPGGLQIGDLVNIDLDLEIVQSLQHGHGGWTDGMFETLTTTGTVCGIDEDHDIVVQYPS
GNRWTFNPAVLTKANVVRSGDAAAGAEGGTSQFVVGDLVQICYDIDRIKLLQRGHGEWAE
AMLPTLGKVGRVQQIYSDSDLKVEVCGTSWTYNPAAVTKIAPSGSAVSNASGERLSQLLK
KLFETQESGDINEELVKAAANGDLAKVEDILKRPDVDVNGQCAGHTAMQAASQNGHVDVL
KLLLKHNVDLEAEDKDGDRAVHHASFGDEGSVIEVLQRGGADLNARNKRRQTPLHIAVNK
GHLQVVKTLLDFGCHPSLQDSEGDTPLHDAISKKRDDMLSVLLEAGADVTITNNNGFNAL
HHAALRGNPSAMRVLLSKLPRPWIVDEKKDDGYTALHLAALNNHVEVAELLVHQGSASLD
IQNVNQQTALHLAVERQHTQIVRLLVRAEAKLDVQDKDGDTPLHEALRHHTLSQLRQLQD
MQDVSKVEPWEPSKNTLIMGLGTQGAEKKSAASIACFLAANGADLTIRNKKGQSPLDLCP
DPSLCKALAKCHKEKSSGQVGTRSPSLNSNIESLEECMVCSDMKRDTLFGPCGHIATCSL
CSPRVKKCLICKDQVQSRTKIEECVVCSDKKAAVLFQPCGHMCACENCASLMKKCVQCRA
VVERRTPFVLCCGGKGMEDDDDAADDDDDDDDDDDGDDDDDDDDDDDDDDDLRSSNTMAG
GSQDLLQPNNLALSWSSGNIPALQRDKDNTNVNADVQKLQQQLQDIKEQTMCPVCLDRLK
NMIFMCGHGNLPXCGGDRMSECPICRKAIERRILLVLDLPTDSVRFS
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgactaccggcaggaataaccgggcgatgatggaaggagtcggggcgagggtggtccgc
ggacccgactggaagtgggggaagcaggacggcggagagggacatgttggcaccgtcagg
agttttgaaagtccagaggaggtggtggttgtctgggataacgggacggcggcgaactac
cgttgttccggagcctacgacgtgaggatactggacagtgcaccaacaggcatcaaacat
gatggaaccatgtgtgacacctgccgtcaacagcctatcataggcattcgctggaaatgt
gctgaatgcaccaactacgacctctgcacaacctgttaccatggagacaaacatcacctg
agacaccggttctacaggatcaccaccccaggcagtgagagagtccttttggagtcgcgt
cgcaagtcgaagaaaatcacggccagagggatcttcactggcggccgggtggtgcgaggt
gtggactggcagtgggaggaccaggatggaggcaatgggaggagaggaaaggtgacagag
atccaggactggagtgcggccagccctcacagcgccgcctacgttctgtgggacaacggg
gccaagaacctgtaccgcgttggctttgagggaatgtcggatctgaaatgtgtccaggat
gccaaaggaggctcgttttacagagaccactgtcctgttttgggtgagcagaacggcaac
agaaatcctggcggtctccagattggagatctggtcaacattgacttagacctagagatt
gtccagtccctccaacacggccacggtgggtggaccgacggcatgttcgagaccctcact
accactggcacagtgtgcggcatcgatgaggatcatgacattgtggtgcagtaccccagt
ggaaacagatggacgttcaatccagctgtgctgacaaaggccaatgtagtgcgcagcgga
gacgctgcagccggggcagagggaggcacttcccagttcgtcgtgggagacctggtccag
atttgctacgacatcgaccgcatcaagctgctgcagagaggccatggagagtgggctgaa
gcgatgctgcctaccttaggcaaggtggggcgcgtccagcaaatctactctgacagtgac
ctgaaggtcgaggtatgtggaacttcgtggacgtacaatcctgctgctgtcaccaagatc
gccccctctggctctgctgtcagcaacgcctctggagagcgtctgtctcagctgctgaag
aaactatttgagacacaggagtccggagacatcaatgaggagcttgtcaaggcagcagcc
aatggagacctggcaaaggtggaggacattctgaagaggccggatgtggatgtgaacggt
cagtgtgccggacacactgcgatgcaggcagccagtcagaacggtcacgtggatgtcctg
aagttgctgctcaaacacaacgtggaccttgaggctgaggacaaagatggagaccgggcg
gtgcaccacgcatcctttggcgacgagggctccgtcattgaggtgctgcagaggggcggt
gccgatttgaatgccaggaacaagcgaaggcagactccattacacatcgctgtcaataaa
ggccacctgcaagtggtcaaaaccctgctggactttggctgccacccgagcctccaggat
tcggagggggacacacccctgcatgatgccataagcaagaagagagacgacatgctgtca
gtgctgctggaggccggtgcggacgttaccatcaccaacaataacgggttcaatgccttg
catcacgctgccctgcgaggaaaccccagtgccatgcgtgtgctgttatccaaactgcca
aggccttggatcgtggacgagaagaaggacgacggttacaccgcactgcacctggctgcc
ctcaacaaccatgtggaggtggctgagctgctggtgcaccagggcagcgccagcttagac
atccagaatgtcaaccagcagacagcgttgcacctggctgtggaacgccaacacacccag
attgtccggctgttggtgcgggcagaggccaagctcgacgtgcaggacaaggatggggac
acaccacttcacgaggcgctgcgtcaccacacgctgtcccaactgcgacaactccaagat
atgcaggatgtcagcaaagtggagccttgggaaccctccaagaacacattaatcatgggc
cttggcacccagggggcagagaaaaagagtgcagcatccatcgcctgtttcctggcagct
aatggagcagacttgaccattcgtaacaagaagggccagtcccccctggacctgtgtccc
gaccccagcctctgcaaggccctggccaaatgtcataaagaaaagagcagtggacaggtg
ggcacccgcagcccgtctctgaacagcaacatcgagtcgctggaggagtgtatggtgtgt
tcggacatgaagagagacactctgttcgggccctgcggacacatcgccacctgctccctc
tgctcgccgcgcgtcaaaaagtgtctcatctgcaaggaccaggtccagtctagaaccaag
atcgaggagtgcgtagtctgctctgacaaaaaagcagccgtgctgttccagccctgtggc
cacatgtgcgcttgtgagaactgtgccagcctcatgaagaagtgcgtacagtgtcgggct
gtagtagaacgccgcactcctttcgttctctgctgtggagggaaaggtatggaggatgat
gatgatgccgctgatgatgatgatgatgatgatgatgatgatgatggtgatgatgatgat
gatgatgatgatgatgatgatgatgatgatgaccttaggagctctaacactatggcaggg
ggatcgcaggatcttctccagcccaacaatctggctctaagttggtccagtggcaacatc
ccggccctgcagagagacaaggacaacaccaacgtcaacgctgatgttcagaagctccag
caacagctccaagacatcaaggaacagaccatgtgtccggtttgtctggaccggctcaag
aacatgattttcatgtgcggccacggcaacctgccangctgtggcggggaccgaatgagc
gagtgccccatctgccgcaaggccatcgagcgccgcatcctcctcgtactagacctcccc
acggactctgtccgcttctcttaa
DBGET
integrated database retrieval system
