Hippoglossus hippoglossus (Atlantic halibut): 117777752
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Entry
117777752 CDS
T07778
Symbol
depdc5
Name
(RefSeq) GATOR complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
117777752 (depdc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117777752 (depdc5)
Membrane trafficking [BR:
hhip04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
117777752 (depdc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
117777752
NCBI-ProteinID:
XP_034468553
LinkDB
All DBs
Position
17:complement(278828..307012)
Genome browser
AA seq
1592 aa
AA seq
DB search
MKTNKSYKLVLHKKGFAGSDDELVVNPKVFPQVSLGDIIEIAHPTDEYSPLLLQVKSLKE
DLQKETISVDQTVAQAFKLRAYQDVIVNIVDPKDVTLDLVELTFKDQYIGRGDMWRLKKS
LVTTCAYVTQKVEFAGIRAQASELWVKGEKVTCGYISEDTRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVNGFLSDLFAKWKEKNCSHEVTVVLFSRTFYNAKSIDEFPEILRG
SIRQDHEGRFYEDFYRVVAQNERRDEWTSLLVTIKKLFIQYSVLVRLKEADGFPVGYNST
AAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNRLTSGDSRVGDDYNLPHWINHSFYTSKSLNSCSSFT
PRIKLAGHKIHAEKFKSSKDHTLCAPKDSDNSLPIQVDYDAYDAQVFRLPAPSRIQRSTN
FSDNVSFRMGRDKEMSGRKSWGSVDVSAGIGASPPIRSGGPEEKRSLASDDSLGPVSNML
LIPRMPPAQYEVSSSLGYTSTRELLEKMMDSQRDSSAPGRFTVGSAESTLHIRPGGYTPQ
RALINPFTPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQGSQQRDPAHT
SAELLELAYHEATGRRTTSRQAGEGLYIGGGMDEFTGSPGSNNSGTLANHGSSFEDFSLI
SADPTLLLSAPPTVPSFCCTVGVDWKSLTTPACLPLTTDYFPDRQALQNDYTEGCYDLLP
HSDLERREDESPVMSASQVFEEFICQRLMQGYQIIVQPNNRKPQPAVATPLGSSPLYSRG
LVSLRRAEEEETVYWLSMGRTFHKVCLKDKIITVTRYLPKYPYESAQIQYSYSLCPPHSD
AQFVSCWVEFGHERLEEYKWNYLDQYICSAGSEDFSLIDSLKFWRTRFLLLPAGGARRVA
DGEGHWDIYGEGASARVGGSGDWLLLDGFVRFLEGLNRIRRRHRSDRIIRPKGTPMKGLQ
ITSPLPPYPPEPVAPQGKKGTSALSALLEMDQNQKTLEEQQQQMKPSAAVSDPTTVATAP
THIDSPRKDAAFILDFIRSPRSSYIYHSQLPAEVSEAADKGVQPGATGGAAAQPAGETAA
SSSIDTSGQSATGVVSLSSSSPPLEILEAIKHPTTGVQLLPEQKGLPLNCFISAEVVHWL
VNNVDGVDTQAMAVDKMQKMLDEGLVAHASGEAMRTFVYGFYFYRIVGEKDGPISQLPPT
APGVWSTAALEDFTLFQRKWFEVAFVLEEQQPCDLPTFLLPWLPSRPASYASRHSSFSRS
FGGRSQAAALLAATVPEQKTVTLDVDVNNRSDRTEWCSCYYHGNFSLTAAFEIKLHWMAV
TAAVLFEMVQGWHRKAASCGFLLVPVLEVPFALTSYLYGDPLRAQLFISLNIQCLLKNGS
DKLFEGFEPETYWERMQLFQEAILYRFGFVHDKFSASAFNFPSENKPQYIHVTGTLFLQL
PYSKRKYSSGQQRRRRNSTTSNSHGPFGSEEQVGYYWAYNTMLTKAWRTGVLGDERLSDR
LLRDFTDFCSNKDNRLLNFWDSCQEKMNTSAP
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccaacaagtcatataagcttgtgctgcacaagaaaggttttgctggaagtgat
gatgagttggttgtcaacccaaaagttttccctcaagtcagtcttggggacataattgag
attgcgcaccccacagatgaatacagtcctctcctgctgcaagtgaagagccttaaagag
gatttacagaaagagacaatcagtgtggaccagactgtagcacaagcctttaaactccgt
gcataccaggatgtcattgttaacattgttgacccaaaggatgtaacactagacttggtg
gagctgactttcaaggaccagtacattggcagaggagatatgtggagactaaagaagagc
ctggtcaccacatgtgcttatgtgacacagaaagtggagtttgcaggaatcagagcccag
gccagtgaactctgggtaaaaggagagaaagtgacctgtggttacatcagtgaagacacc
agggtggtgttcagatccacatctgcaatggtgtacatcttcatccagatgagctgtgag
atgtgggactttgacatctatggtgatctctactttgagaaggctgtaaatggtttcctg
tctgacctttttgccaagtggaaggagaagaactgtagtcatgaggtgacagtcgttctt
ttctcacgtacattctacaatgctaaaagtatagatgaatttccagagattttgagaggc
tccatcaggcaagatcatgagggacgattttatgaagacttctatagggttgtggctcag
aatgagaggcgggatgagtggacatctttactggtcactattaagaagcttttcatccag
tattctgtcctggtgcgactgaaagaagcagatggttttcctgtgggttataactcaact
gctgctcagggaaactacctggaggccattaacttgtccttcaacgtatttgacaagcac
tacatcaaccgaaactttgaccgcactggacaaatgtcagttgttattacacctggggta
ggagtgtttgaagtggaccgtctactgatgattctcaccaaacagagaatgattgacaac
ggtattggggtagacttggtgtgtatgggggagcagccattgcacgcagtaccattgttc
aagctgcacaataggttgacctctggagactctcgtgtgggagatgactataacctgccc
cactggatcaaccacagcttctacacctccaaaagtctgaactcttgtagctccttcacc
cctcgaatcaaactggctggtcacaagattcatgcggaaaaattcaagagcagcaaagac
cacactctctgtgctccaaaggactctgataacagcctgcctatacaggtggactatgat
gcctatgacgctcaggtgttcagacttcctgctccttcgcgaattcagagaagcaccaac
ttcagtgacaatgtgtctttcaggatgggtcgagacaaagagatgagtgggaggaagagc
tggggctccgtggacgtcagcgcaggcataggggcatcccctcccatacgctctgggggt
cctgaggaaaagcgtagcctggcctctgatgatagtctaggcccagtgtccaacatgctg
ctgatacctcgcatgcctcctgcccaatatgaagtcagcagttctctcggatacacaagc
accagggagttgttggagaagatgatggactctcagcgagactccagtgccccgggcagg
ttcacagtgggaagtgcggagtcgacgctgcacatccgtccaggaggttacaccccacaa
agggctctgataaaccccttcacaccatccaggatgcccatgaagctcacctctaaccgc
cggcgctggatgcacactttccctgtcggtccttctggagaggccatccagatccatcac
cagaccagacaaaacatggctgaactgcagggcagccagcagagagatcctgcccacacc
tccgccgagctgctggagctggcttatcacgaggccactggaaggcgaacaacatctcga
caagcaggagagggcctttacattggtggagggatggatgagttcactggaagcccaggg
agcaataacagtggaactttggctaaccatggctcctcctttgaagacttttccctcatc
agtgccgatccaaccctgctgctgtctgcacccccgacagtgcccagcttctgctgcaca
gtgggggtagactggaagtctctgaccacaccggcctgcctgcccctcaccaccgattac
ttcccagaccgccaggcactacagaacgactacaccgagggctgctacgaccttctgccg
cacagtgacctggagaggcgggaggatgaatctccagtgatgagtgcgtctcaggtattt
gaggagtttatctgtcagaggttgatgcagggctaccagatcattgtccagcccaataac
agaaagccacagcctgctgtagccacgcctcttggcagcagccctctttactccagaggg
ctggtgtctctgcgtcgggcggaggaggaggagacagtgtactggctcagtatgggccgg
accttccataaagtttgtctcaaagacaaaataatcactgttactcgctacctgccaaag
tacccatacgagtcagctcagatccagtacagttacagcctgtgtcctccacactctgat
gctcagtttgtctcctgctgggtggagtttggccacgagagactggaggaatacaaatgg
aactacctagaccagtacatttgctctgctggctcagaggacttcagtttgatcgactca
ctgaagttctggaggactcgcttcctactgctgccagctggaggtgcacgccgagtggca
gatggggagggccactgggatatttatggggagggagcaagtgctagggttggtggtagc
ggggactggctactgctggatggtttcgtccgcttcctggagggtctcaatcgcattcgc
cgacgccaccgctctgacaggataatcaggccaaaaggcacaccaatgaaaggactgcaa
atcacgagtcctctccctccatatcctcctgagcctgttgccccacaaggcaagaaaggc
acatcggctttgtcggccctgctggagatggatcagaatcagaagacgctggaggagcag
cagcagcagatgaagccctcagcagctgtcagtgaccccaccactgttgcgacagctccc
acacatatagacagtccccgcaaggacgctgcctttattttggattttatacgtagccca
cgctcctcctacatctatcactctcagttgcctgctgaagttagcgaggctgcagacaag
ggagtccagcctggagcgacaggtggagcagcagcacagccggcaggagagactgcagcc
agcagcagcatagataccagtggccagtctgcaacgggagtcgtctctctgtcctcctcc
tcacctcccttggagatcctggaagcaatcaaacatcccacgacaggtgtacagctgctc
ccagagcagaaaggtctcccactcaactgctttatcagcgctgaggttgttcattggctg
gtcaataatgtcgatggagtggatacacaggcaatggctgtggataaaatgcagaaaatg
ctggatgaaggtttggtggcccatgcttctggagaagcaatgcgcaccttcgtctacggt
ttctacttctacaggattgttggagagaaggatgggccaatctcccagctcccccccaca
gctcctggagtttggtccactgcagccctggaggacttcaccctgttccagagaaagtgg
ttcgaagtggcttttgtattagaggagcagcaaccctgtgacctcccgactttcctcctg
ccctggctgcccagccggccagcatcctacgcaagtaggcacagctccttcagccgcagc
tttggaggacgcagccaggccgctgcactgctagctgctacagtcccggagcagaagaca
gtcacgctggatgtggatgttaacaaccgcagcgaccggactgaatggtgcagctgttat
taccatggaaacttctccctcaccgctgcctttgagatcaaactgcactggatggctgtc
actgctgcagtgctctttgagatggttcaagggtggcataggaaagcagcctcgtgcggc
ttcctgttggttccggtgctggaggttcctttcgctctgacctcctacctgtatggagac
ccactgagagcccagctcttcatctctctcaacatccagtgtctgctgaagaacggcagt
gacaagctatttgaaggttttgaaccagagacctactgggaaaggatgcagctctttcag
gaggccatactgtacagatttggcttcgtgcacgacaagttttctgcttctgcttttaat
ttcccctctgagaacaaaccccagtacattcacgttacaggaaccttgttcctacagctc
ccatactccaagaggaagtactcgagtggacagcagcgccgccgccggaactccaccacc
tccaacagccacgggccgttcggcagcgaggagcaggtcggttactactgggcctacaac
accatgctgaccaaagcctggaggacaggtgtgctgggtgacgagaggctgtctgaccgc
ctgctcagggacttcactgacttctgcagcaacaaggacaatagactgctcaacttctgg
gacagctgccaggagaaaatgaacaccagcgctccctga
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