Hippoglossus hippoglossus (Atlantic halibut): 117777822
Help
Entry
117777822 CDS
T07778
Symbol
nhej1
Name
(RefSeq) LOW QUALITY PROTEIN: non-homologous end-joining factor 1
KO
K10980
non-homologous end-joining factor 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
117777822 (nhej1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhip03400
]
117777822 (nhej1)
DNA repair and recombination proteins [BR:
hhip03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
117777822 (nhej1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XLF
XLF_CC
XRCC4
Motif
Other DBs
NCBI-GeneID:
117777822
NCBI-ProteinID:
XP_034468701
LinkDB
All DBs
Position
2:3532170..3545044
Genome browser
AA seq
319 aa
AA seq
DB search
TEPPPDVLLQHPWLPVGISGCQLLAKIWFGDAAYHILLTDMSCVWEERMDSAAIQRRSQE
LNRRLRAPVKAFFSHLCRVAQPCLSGSGERADGQAQISLTRREHDNISIRLKSELAELPF
YWEFRCTPAPVTLVCAQLLRPLLAMSRLLQRQVGQLGGLLGKKDLEIQDYRENGATLSRE
RLQTDVFEEQTYRENSFQRXEALPLVCSEQQETLGFDDDLQQLYASIVAHGNARARKRKL
SEERSVQEDRPPTEERDLTPSLGVGSVSKTAERVGEQSHNRADATGAAMADGATVQQSFD
HPAGRPSSKPKKKKVGLFR
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
acggagcccccccctgacgtcctcctccagcatccctggcttcctgtgggcatcagcggc
tgccagctcctcgctaagatctggtttggagacgcggcgtaccacatcctgctgactgac
atgagctgcgtgtgggaggagaggatggactcagccgccatccagaggcgatcacaggag
ctgaaccggcgtttgcgagccccggtcaaagctttcttctcccacctgtgtagggtggct
cagccctgtctgtcgggaagcggcgagcgagccgatggccaggctcagatctctctgacg
cgacgcgagcacgacaacatcagcatcaggctgaagagcgagctggcggagctgcccttc
tactgggagtttcgctgcacccccgcccccgtcacactggtgtgtgctcagctgctgcgc
cccctgctggcgatgagccgcctgctgcagcggcaggtggggcagctgggaggtctgctg
gggaagaaggacttggagatccaggactacagggagaacggagccacgctcagcagagag
cggttgcagacggatgtttttgaggagcaaacctacagagagaactcatttcaaaggtga
gaggctcttcctctggtttgttcggagcagcaggaaactctgggcttcgacgacgacctg
cagcagctgtacgcctccatcgtcgcccacggaaacgcacgtgcacgaaaacgcaaactg
tcggaggagcgctccgttcaggaggaccggccgcccactgaagaacgtgacctcacgcca
tccttaggtgtcgggtctgtcagtaaaacagctgagagggttggagaacagagccacaac
cgggcagatgcgactggagccgcaatggccgatggagccacagtccaacagtcttttgac
cacccagcagggcgaccgtcctccaaaccaaagaagaagaaagtcggactgttccgatga
DBGET
integrated database retrieval system
