Hippoglossus hippoglossus (Atlantic halibut): 117777829
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Entry
117777829 CDS
T07778
Symbol
wdr33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117777829 (wdr33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117777829 (wdr33)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
117777829 (wdr33)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_EML
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
WD40_Gbeta
EIF3I
Beta-prop_IFT140_1st
Beta-prop_Aladin
ASA1
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_WDR19_1st
DSE1_N
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EIPR1
CFAP251_N
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
eIF2A
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_NOL10_N
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_2nd
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_WDR41
Ge1_WD40
PEP5_VPS11_N
DUF8689
Motif
Other DBs
NCBI-GeneID:
117777829
NCBI-ProteinID:
XP_034468712
LinkDB
All DBs
Position
17:complement(24431037..24448962)
Genome browser
AA seq
1084 aa
AA seq
DB search
MATDIGSPQRFFHMPRFQHQAPRQVFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIRYLENRLWQRDHRDFRAIQPDAGCYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVIRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKWNLNG
NWLLTASRDHLCKLFDIRNLKDELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
TGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGMEYDDMDLNSMASIPGMGIPEQLKAAMEQEQSSKEAAPEVEMSIPGLDWGMDE
VMGKDAKKVPQKKVPYAKPIPAQFQQAWAENKVPMMPPSGDLSKERKVEQKVEGKKKSQA
EMEQEMAALQYTNPQLLEQMKMDRMSTDGNMGPPQGQGTMPPFPGPGGPAGPGAPMPPGQ
QGFHPNMPPQQMPNNMPPPMGPGGMQPPFIPPGQMGPPSGPQSHQGPPQGMMGPPDMQGP
QGLQRHPGPHRNMGPQGPHSMGPGPRGMQGPPGGMMGPPPRGMGPRDPQGPPSQGGMMPP
QGNMMGPQGPMQGGMMGPPPRTHNNMPNNYGMGNMQGPPGGMHGPPGKMQGPPGNMQGPH
GNMQGPPGNMQGPHGNMQGPPYMHQGQSSGPIMHGMGPQGPNNKGDPRGPPPNHHMGPSD
RQGPGGPDQGSGPYWADNQQGRRGPQDFEGGQDFHGRGEEGWRPGPGYQGGGGHRGGGHR
GGNGGNWGSDERFSGGEFRGRRDDRYRGGGPGRPGGRGYPDAYGGQEEGFDGPEEIGRGW
DTGGRGRPPRGGGAPRGGGQDGYRDGQQMHDGSSPAGRERPSSLQGMDMASLPPRKRPWQ
DGPGTGERESPGADGGRPPQREEGSYGPSGRGGRGGWGPGGPGPGPRRGGPPPRGALRGG
VRGR
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagacattggctcaccgcagcggttcttccacatgccgcgtttccagcatcaa
gcgccgcggcaggttttctacaagaggccggacttcgctcagcagcaggcgatgcagcag
ctcaccttcgacgggaaacgcatgaggaaggcggtgaaccgcaaaaccatcgactacaac
ccgtctgtcatcagataccttgagaaccgtttgtggcagcgagaccatcgagacttcaga
gccatccagcccgacgcaggatgttacaacgacctggttcctcctatcgggatgttgaac
aatccaatgaacgctgtcaccaccaagtttgtccgaacctccaccaacaaagtcaagtgt
cctgtgtttgtgatcaggtggactcctgagggtcgacgtctggtcactggagcgtccagc
ggagagttcacgctgtggaacggactcaccttcaactttgagaccattttacaggcccac
gacagtccagtgcgtgccatgacctggtctcacaacgacatgtggatgctgactgcggac
cacggcggctacgtgaagtactggcagtccaacatgaacaacgtcaagatgttccaggct
cacaaggaggccattagagaagccagtttctcccccacagataataaattcgccacctgc
tcagacgatggcaccgttcggatctgggactttttgcgttgccatgaggaacggatcctc
cgaggtcatggcgctgatgtgaagtgtgttgactggcatcccactaaaggcctcgtagtc
tctggcagtaaagacagtcaacagccaatcaaattctgggaccccaagactggacagagc
ctggctacacttcacgcccataagaacacggtgatggaggtgaagtggaacctgaatggt
aattggctgctgacggcgtcacgtgaccacctgtgcaaactgtttgacatcagaaacctg
aaggacgagctgcaggtgttccgaggacacaagaaggaggcgacggctgttgcctggcat
cccgtccatgaaggtctgtttgccagcggaggttctgatggttctctgctcttctggcac
actggggtggagaaggaggtgggagggatggagatggctcatgagggaatgatctggagt
ctggcatggcacccgctgggtcacatcctgtgctccggctccaacgaccacaccagtaaa
ttctggacgaggaatcgaccaggcgataagatgagagaccgttacaacttgaacctgctg
ccggggatgtcggaggacggcatggagtatgacgacatggacctgaacagcatggcctcc
atccccggtatggggatccccgagcagctgaaggctgccatggagcaggagcagagcagt
aaagaggcagccccggaggtcgagatgtctatccctggtctggactggggcatggacgaa
gtcatgggtaaagacgccaagaaggtccctcagaagaaagtgccgtacgccaaaccaatc
ccggcccagttccaacaggcgtgggcggagaataaagttcccatgatgccgccctctgga
gatctgtccaaagagcgaaaggtggagcagaaggtggaggggaagaagaaatctcaggca
gagatggagcaggagatggcagctctacagtacaccaaccctcagctgctggagcaaatg
aagatggaccggatgagcacagacgggaacatgggccccccacagggacagggcaccatg
ccccccttccctggccccggaggccctgcaggtcctggggcccctatgcctcctggccag
cagggatttcacccaaacatgcctcctcagcaaatgcccaataacatgcccccccccatg
ggccctggaggtatgcagccccctttcattccccctggacaaatggggcccccctcagga
cctcagtctcaccaggggccgcctcagggcatgatgggaccacccgacatgcaaggacct
caaggattgcagagacatcctggccctcatagaaacatgggtcctcaagggcctcacagt
atgggtcctggacccagagggatgcagggccctcctggtgggatgatgggcccccctcct
cgaggaatgggtccaagggatcctcaagggcctccatctcaggggggcatgatgccacct
caaggaaacatgatgggcccccagggtcctatgcagggtggaatgatgggacccccaccc
aggacacacaacaacatgccaaacaattatgggatgggcaacatgcaggggcccccagga
ggaatgcatggacctccaggaaaaatgcaggggcccccaggtaacatgcaaggaccccat
ggaaacatgcagggcccccctggcaacatgcaaggaccccatggtaacatgcaagggccc
ccatacatgcaccagggtcaaagctcgggacctataatgcacgggatggggccgcagggg
cccaacaacaaaggagatccccgggggccaccgcctaaccaccatatgggcccttctgac
cgacagggtcccggaggaccagaccagggatctgggccgtactgggcggacaaccagcag
ggtcggcgtggaccacaggactttgagggaggccaggactttcacggcagaggagaggag
ggctggagacctggaccaggataccagggagggggaggacacaggggtggaggacacaga
ggagggaatggagggaactggggttctgacgaaaggttcagcggaggagaatttagagga
cggagagacgacaggtacagaggaggcggccctggccggcctggaggtcgtggttaccct
gatgcgtacggcggccaggaggagggcttcgacggcccggaggagattggccgaggctgg
gacaccggaggcagagggagaccgcctcgaggaggaggtgcccccagaggaggaggtcag
gatggttatcgggacggtcagcagatgcatgatgggtcgtcaccagctggtcgtgagcgc
ccgtcttcccttcaggggatggacatggcgtctttgcccccccgaaagcgtccatggcag
gatggaccaggaactggagagcgagagtcccccggagctgatggaggtcgacccccccag
agggaagaaggcagctacggtccgtctggtcgaggtggacgaggaggctggggtcccgga
ggaccgggacctggccccaggagggggggaccaccacccagaggagcactgaggggaggc
gttcgtggccggtag
DBGET
integrated database retrieval system
