Hippoglossus hippoglossus (Atlantic halibut): 117777832
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Entry
117777832 CDS
T07778
Symbol
ubtfl
Name
(RefSeq) upstream binding transcription factor, like isoform X1
KO
K09273
upstream-binding transcription factor
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhip03000
]
117777832 (ubtfl)
03021 Transcription machinery [BR:
hhip03021
]
117777832 (ubtfl)
Transcription factors [BR:
hhip03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
117777832 (ubtfl)
Transcription machinery [BR:
hhip03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
117777832 (ubtfl)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
DUF4473
DUF4872
HMG_WDHD1
Poxvirus_B22R_N
Motif
Other DBs
NCBI-GeneID:
117777832
NCBI-ProteinID:
XP_034468717
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All DBs
Position
17:24528589..24539992
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AA seq
774 aa
AA seq
DB search
MFSPGVPPPAALGGVSYRTRRSFCRIRFDLTPRGLRLKNTHFESPEIILTSTVVCSVNPG
FCLNRKEGGACCMMNGSSSSVSASQSSRVKSEQDDWSKEDCLTLLERIRSLLPDVDSMKY
KTTESHFDWEKVCFGSFTGDMCRQKWQKVSTEVRKYRTMTELIVDAIEFVKNPYKGKKLK
THPDFPKKPLTPYFRFFMEKRAKYAKIHPEMSNLDLTKILSKKYKELPDKKKQKYITEFQ
REKEEFEKNMARFKEEHPELMEERKKSDLPEKPKTPQQLWYNHEKKTYMKLHPEVSQKEL
KEALRRQWSQLSDKRRLKWISKALELQKDYEDSMRAYHEAHPDVNSDDHVRSVLTKAERQ
LKDKFDGRPTKPPPNGYSLYCAELMVNMKDVPSTERMVLCSKQWKIMTQKEKDMFQKRCE
QKKKQYDVDLKRFLESLPEEERDRVLTEEKLGGGRLSVGVASSPRRAKSPSLKGRCREVE
PESWVPARPPKERRDGKKTAKLPETPKTAEEMWQHSVIGDYLAKYRSDRRKAQAAMEATW
KSMEKKEKIPWIKRAAEDQKRYEVQYQHVRELLEMRAPAAGPTQRKPKFDGEPKKPPVSG
YQMFSQELLTNGELNHFSLKERMVEIGKRWHTLSQSQKDKYKKQVEEQQVEYKAELEAWV
QSLSPQEQAVYKEFSSSKRRSTTKARSSPGAKVHVMAKGKAVGSRAATPGVSVGKRAMAY
RAKQDMSDTDDEEEKSSSDSDEDDETSGTTDSDDENDDDEDQTSSEESSDSDSD
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgttttcccccggagttcctccccctgcggcgctgggcggagtttcataccggactaga
cgctccttttgtcggattcgtttcgacctgactccccggggtttacggctgaaaaataca
cactttgaaagtcctgaaataatcctaacgagcaccgtggtgtgcagcgtgaacccgggt
ttctgtctgaaccggaaggagggaggagcctgctgcatgatgaacggcagcagcagcagc
gtatctgcgtctcagagctccagggtcaaaagtgaacaagatgactggagtaaggaggac
tgtctcactctgctggagaggatccgcagtctgctgccggacgtagactccatgaagtat
aaaaccacagagtcgcactttgactgggagaaagtttgtttcggcagcttcaccggagac
atgtgtcgccagaagtggcagaaagtgtcgactgaggttcgtaagtacaggacgatgaca
gagctcatcgtggacgccatcgagtttgtgaagaatccgtacaaaggaaagaaactgaag
actcacccagatttccctaaaaaacctctgactccctactttcgcttcttcatggagaaa
cgagcaaaatatgcaaaaatccacccggagatgagcaacttggatctcaccaagattctc
tccaagaaatacaaagagctgcccgacaagaagaagcaaaaatacatcacagagtttcaa
cgagagaaagaagagtttgagaagaacatggctcgattcaaggaggagcatccggagctg
atggaggagaggaagaagtccgatctgccggagaaaccgaaaactccacaacagctgtgg
tacaaccacgagaagaagacgtacatgaagctgcatccagaggttagtcaaaaggagctg
aaggaggcgctgaggagacagtggtcacagctctccgacaagagacgactgaagtggatc
agcaaggccctggagctgcagaaggactacgaggacagtatgagagcatatcatgaagct
catccagatgtgaactcagatgatcacgttcgttccgtcctcaccaaagcagagcgacaa
ctgaaggacaagttcgatggaagaccgacaaaaccaccacctaatggctactctctgtac
tgtgcggagctgatggtgaacatgaaggatgtccccagcacagagcgcatggttctctgc
agtaaacagtggaaaattatgacgcaaaaagagaaagatatgttccagaaacgctgcgag
cagaaaaagaagcagtacgacgtcgacctgaagaggtttctggagagtctgccagaagag
gaacgagaccgtgtcctaacagaggagaaactgggcgggggcagattgagtgtgggtgtg
gcttccagccctcgccgagccaagtctccatctctcaagggtcggtgtcgggaggtggag
ccagaatcatgggtacctgccagaccgccaaaagaaagacgggacgggaagaagacggcg
aagcttccagagacaccaaaaacagcggaagaaatgtggcagcacagcgtgatcggagat
tatttagcaaaatacagaagcgaccgcaggaaggcgcaggcggcgatggaggcaacttgg
aagtcgatggagaagaaggagaaaattccgtggatcaagagggcggcggaggaccagaag
cgttatgaggttcagtaccaacatgtgagggagctgttggagatgagggctccagccgca
ggtccgactcagaggaaacccaagtttgacggagaaccaaagaaacctccagtgagcggg
tatcagatgttctcccaggagctgctgaccaatggcgagctgaaccacttcagtctgaag
gagcggatggtggagatcgggaagcgatggcacacactgagtcagagtcagaaagacaag
tacaagaagcaggtggaggagcagcaggtggagtacaaggccgagctggaggcctgggtc
cagtctctctctcctcaggagcaagccgtctacaaggagttctcttcctctaaacgtcgc
agcaccactaaagcgcgcagcagccccggagctaaagtccatgtgatggcgaaagggaag
gcggtcggttcaagagccgcaacaccgggggtcagcgtgggcaagagggccatggcgtac
cgagctaagcaggacatgtccgacaccgacgacgaggaggagaaaagttcgtctgactcc
gatgaagacgacgagacgtcaggaaccacggacagcgacgatgagaatgacgacgatgaa
gatcaaacgtcctcggaggaatccagtgactctgactcagactag
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