Hippoglossus hippoglossus (Atlantic halibut): 117777874
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Entry
117777874 CDS
T07778
Symbol
kcnn1a
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1a isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hhip04040
]
117777874 (kcnn1a)
Ion channels [BR:
hhip04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
117777874 (kcnn1a)
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Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DUF7310
DALR_1
Motif
Other DBs
NCBI-GeneID:
117777874
NCBI-ProteinID:
XP_034468815
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Position
17:complement(9892813..9939733)
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AA seq
1020 aa
AA seq
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MRHRCAGAVHQHQTPDEKQASSKKSRDPDAPVFSLPPPPSSHHHRDRTPTTAAQRQSLQE
LPCLSQPTGRPVHSGDPLPLARYDTAQRPSHRAAEPSTGQPAHLQQDPWAPAGSQQQQQQ
PPPTQEKPPVFPSCHCSFSEQEASLSQNQHHPVDPLPPQPSPPFPPPIPPPPTSSSSSLL
FSRESKRGDRLPSSANNYYQQASIVERCRGGGGAGGHRDHRQLQQQQQHQQQQQQQQQQQ
HSNLRLQQRDPSPEGIRANSQKGRSLNVCESTEANRRAFESQDLQQQQIPQLRAQQQLLV
GSSLPINYCASGSGELCRTHQAPLLQQQQQEQQQQQQQQQQGALELCPQRPQQQQQQQQQ
HCEQDRNKSGRIGEQAQPHSRDSRVTPPVTQQAYAGNSSATGSNSSKDSPNYGSSYHLWP
ESPHKGEERIRIDLHKATTEQKKLSHAGSKPSLSESSGRLPQIAMNTCKYNGGVVRPLVG
SLASSSRRNLAELDSETQPLQTLHSSGLEVVVSKGNGGEDPSKASNESLVREGSVRVGGR
APQKKNRDIGYRLGHRRALFEKRKRLSDYALIFGMFGIVVMVTETELSWGVYTKESSYSF
ALKCLISLSTVILLGLIIMYHAREIQLFMVDNGADDWRIAMTYERIFFIVLELLVCAIHP
IPGQYVFTWTARLAFTYTPSVADADVDIILSIPMFLRLYLIGRVMLLHSKLFTDASSRSI
GALNKINFNTRFVMKTLMTICPGTVLLVFSISSWIIAAWTVRVCERYHDKQEVTSNFLGA
MWLISITFLSIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHN
FMMDTQLCKRVKNTAANVLRETWLIYKHTKLVKKIDHAKVRKHQRKFLQAIHQAQKLRSV
KMEQRKLNDQANTLVDLAKTQNVMYDLVSELQERSEELDKRIGTLEDKLDSVTGSLQALP
CLISQAITQQQQEFLDGFVHRFRPASLASERSERSERSWTSTARRRRSPSTAPHTSSDSG
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgcggcatcggtgcgcgggagctgtccatcagcaccagacgcccgacgagaagcaagcg
agcagcaagaagagccgagacccagacgctcctgttttcagcctgccgcccccgccctct
tctcaccaccaccgagaccgcactccgaccaccgccgctcagcgccagagcctccaggag
ctcccctgtctgagccagcccaccgggagacccgtgcacagcggcgaccctctacccctg
gcgcgatacgacaccgcccagcgaccttcacaccgagccgctgaacccagcaccgggcag
ccggcgcacctgcagcaggatccctgggccccggccggctcccagcagcagcagcagcag
ccgccgccgacgcaggagaagccgcctgtttttccgagctgccactgcagtttttccgag
caggaggcgagcctttcacaaaaccagcaccatcctgtcgatcctctcccaccgcagccc
tccccaccttttccgccgcctataccgccgccgccgacctcctcctcctcctctctgctg
ttttccagagaatctaaaaggggggatcgtctcccgagcagcgctaataattactaccaa
caggcaagcatcgtggaacgctgcaggggaggaggaggagcaggagggcaccgagaccac
aggcagttgcaacagcagcagcagcatcagcagcagcagcagcaacagcagcagcagcaa
cacagtaatttaagactccaacagagggacccctcccctgaaggaatccgtgcaaactca
cagaaagggcgctctttaaatgtatgtgagtcaaccgaggctaacaggagagcattcgag
tctcaggacctgcagcagcagcagatcccacaattacgagcgcagcaacagctactggtg
gggagcagcttgcctatcaactactgcgccagcggctcaggagagctatgtaggactcac
caggctccactgctgcagcagcaacagcaagagcagcagcagcagcagcagcagcagcaa
caaggtgcactggagctctgtccccagcgtccgcagcagcagcagcagcagcagcagcag
cactgtgaacaagaccgcaataagtctgggaggatcggcgagcaggcgcagccacacagc
cgcgactcccgcgtcacccccccggtaacacaacaggcgtacgcggggaactcttctgcg
accgggagcaacagcagcaaagacagccccaactacggctccagctatcacctgtggccg
gagagcccgcataaaggcgaggagaggatacgcatcgacctccataaggccactactgag
cagaagaagctgagccatgctggatccaagccctccctctctgagagcagtggccgactc
cctcagatagccatgaacacctgcaagtacaatggcggggtggtgagaccactagttggc
agcctggcgtcatcgtcgcgccgcaatctcgcggagctcgactcggagacgcagcccttg
cagacgctgcacagctctggcctggaggtggtggtgtccaagggcaacggcggcgaagac
cccagcaaggcgtccaacgagagcttggtcagggagggcagcgtgcgtgtcggtggcagg
gcgccgcaaaagaagaatagggacattggctacaggcttggccacaggagggcgctgttt
gagaagcgaaagcggctcagcgactacgcgctcatcttcgggatgtttgggattgttgtc
atggtgacagaaacggaactgtcatggggggtttacactaaggaatcttcatactcattt
gcactgaaatgccttatcagcctttccactgttatattgcttggtcttataataatgtac
catgcccgggaaatccagctgtttatggtcgacaatggtgcggacgattggaggatagcc
atgacgtatgagcggatcttcttcattgtgctagagctgctggtgtgtgccatccatccc
ataccaggccagtacgtgttcacctggacggcgcggctggccttcacctacacgccgtca
gtggccgacgctgacgtggacatcatcctctccatccccatgttcctgagactctacctg
ataggcagggtcatgttgctccacagcaagctgttcacggacgcttcgtctcgcagcatc
ggcgccctcaacaagatcaacttcaacacacgctttgtcatgaagaccctcatgaccatc
tgtccaggaactgtcctgctggttttcagtatatcctcctggatcattgctgcatggact
gtgcgcgtctgcgagaggtatcatgacaaacaggaagtgacgagtaacttcctgggagcc
atgtggctcatctcgattaccttcctctccattggctacggggacatggtaccgcacacg
tactgtgggaaaggcgtgtgtctgcttacagggatcatgggagccggttgcactgcgctg
gtggttgcagttgtagccaggaagctggagctgaccaaggccgagaagcacgtccacaac
ttcatgatggacacacaactctgcaaacgagtaaagaacacagctgccaatgtactcagg
gaaacatggctcatctacaaacacaccaagttggtcaaaaagatagatcacgccaaggtg
cggaaacaccagcgcaagtttctccaagccattcaccaagctcaaaaactgcgcagtgtt
aagatggagcagaggaaactcaatgaccaggccaacaccttggtggacctggcaaagacc
cagaatgtgatgtacgacctggtgtcagagctgcaggagcgcagtgaggagctggacaag
cgcatcggcacattggaggacaagctggactcggtgacgggcagcctgcaggcgctgccg
tgcctcatctcccaagccataacccagcagcagcaggaattcctggacggcttcgttcac
cgctttcggccggcctcgctagcctctgagcgctccgaacgctcggaacgatcctggact
tccaccgcccgcaggaggcgctcgccctccacagcaccacacacctcctcagatagtgga
tga
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