Hippoglossus hippoglossus (Atlantic halibut): 117777905
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Entry
117777905 CDS
T07778
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117777905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117777905
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117777905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
GAS
Motif
Other DBs
NCBI-GeneID:
117777905
NCBI-ProteinID:
XP_034468891
LinkDB
All DBs
Position
17:3120019..3150083
Genome browser
AA seq
2524 aa
AA seq
DB search
MAAVLLQVLERTELNKLPKGVQNKLEKFVTELQNANEALKTLHERFKADSEQQYFDIEKR
LSESQEQILSATRDLQTLKEENKKLNEELSTLKGIEGDTFQDKTPQQQTKTKYEIEAEKR
ELARLLEKRTHEVENLTQDVNRLNEKLTETNKVKMELQLKLDEIQSSETSLQHREKRMEQ
EKELLEKKIEWSTAELKNKTDELLNTNRDKGKEILELQSSLKNTKEQVTTLESQLISLKQ
TSESQSKRADDLNNKLKQAKDERSAMEEKYRNELNAHIKLSSLYKGAATDMETKNQELCR
AVEELSKVVKDTGEANKTLEKKVSEGAELKTRLEAELKEKIKKMEKELENVTMKASGKHC
CVPSLTEEQLDHMCPSAAAIAAIVKPGMKFFDLYNAYAECQTHLQLEKQETNRVSRVLDE
IVQEVESKAPVLKRQRQEYESMQRSMASLCNKLEQARMEIHGLQKEKEETKQRCEALERE
KLRVERQLDDTSTQVCVLLAELEEARGNRVIKTDSSSADISSTSEVNNPRQLSFRSVEEL
QKQNQSLLGRLRELEQEKDREQSRVTSARVSELEASVDKLQKEVEHLREQRNQQKQLADS
NARQRDMYKALLTHSTGFSLPPQGLESSSQPAHVRPSAPGTRSTPQRAAAVEAAQSTQAK
AALKQLNDAFSLYKKEKAENDRMLNETNDRLQSQITELSSSHAKLTSQLEFSNKRYEILQ
ETVSAYRREISALQDRNQKMSATAQRHEHIIHTMTQDLRQANEKLSLEEVRVVNVTKERD
MLRQAESRLTREKEAILAEQRNQNLLLTNLKTIQLTMERAETETRQRLNNKIEHLEAELA
SMKSRMDQEVAQRHSLGRTMDAQLLEAKKQLETQNILQQRTRELLRSSEQQVATLKTQLA
SASSSEAVTSSSNTTTPATRAAPVRAQLRVRPQAPAASQQPPSQSEQEIAEVRGLLRTAE
EQNSELAEQLKNANATVDQYRAVVLTLEDSLKKEKESRSPLEIRLKESEEVQKQLEKRIV
EVEKMKQREQDEGRKAVDTVEKQVCELQRNLKTSQMEQQDALERAAASLTQEQKATQDSL
LQTKLASEAQSKYERELMLHAADVEALQELKKRIQQDVAQKRELEEQINKTSSLLQEKTA
ALNTLEKQLKDDLSNQSRRCEELGKQNALLHQQMDDMASKSRQQQQQQQFDLSFSEEGKT
TEQILEILRFVRQEKQIAVARCEVSEGETLRYKQRVEHQDRELKEQQDTLNAERQKMQAT
AKTLVQQEEQLKKMSTISALQENNRMLKMNRDKLQQELQQAQAKVTKLQSDISPLHNSLS
LLSEKNGSLQADRRLLEEDLKHWKAKAQLLASQRKDGDVEEKQKLTNEREAQQRRIAQLA
EETAKLKTELARSSASSNSTQSQLQGLRDSVAQQISEKETLKKDLETKRTEILEKNKTIT
QVKKIGRRYKTQYDELKVQHDKLVAETASKAGSEAAPSQEVQQELAKAQEERNKAREELK
TLKEDVQKKQQETHKALQELEEAQKENQKTKEKSQEVQNQITKNQNQLTQLQSQLSQTQS
QLQQNQNQLTQSQKELQQAKTHTQQVQNQLKSAQTQAQARQSQNQLLQKELQQGKEALQQ
SLASQKELQQTHQTNQQSHNQEVGNLKTTLSQSEGKATELQGQLDSLQKTVGEREADIKR
LQEQLNEANQANEASQATQAKSFQASDTNTAGDTNKAQQEEVAKLRQELLDCKNKEEQLR
QQISDKEEKTKKAFMGAKTKISQLISAKEQLSKETEELKQNKEELEGRVNALKSQYEGRL
LRLDRELRELRETQSQSEPREEPHDQSGSKVVDQPRSTDQRQISLKSPAQDRGGSSLSDP
PTANIRPTPSTPSPSNKPSPSPGSKATPRASIRPMVTPATIPIPTPTATVMPTTQTDSQE
VQISTGVCVHSTTSSLVSAPTSITQPTSLQATAFVQPTQQQAASQEAGSSMDTERPSTSS
SVIGAAGSKRAREEEEEEQEEEEEESRPESSHTSPTTKKLRLKPSLALEMEGDEEMEGEL
RDEGEQQDSPDDSQELPEEGFPILAEDEEDIEEEGVSQSVPSYQMSSQGSTIIRDVIVID
TDSESRESKDGEEKQEDEEEEEEEEEGDEYKEEEEDDEDEDDAGDGEMRGGDESNERSGA
EDEGEEEDPSEATNAEEDVGGASSDSQHASEPPQSSEGSSSATSESDPVRDLVHLPPTSS
SISSPSSSLTPRLPHPRRPTHSLPPRLYIQPPAPELGPPHMQRQSSQLRRTSVGRGLQLT
PGIGSTQHFFDDDDRMVPSTPTLVVPHRTDGFAEAIHSPQVAGLSTRFRFGPPEDLLPQT
SASHSDLGQLASQGGLGMYESPLFLAAHDEDGGGRSVPTTPLQVAAPVTVFTESLPSDSG
DNMASQSVPMVTASTGMASAADDIDEVFVEQEAEGPGIESSLESQTDMESTGQQSDDASL
PSTSQDPDTSSVTQRRMMSSQSLISSLSGRGTRGGRGEARMFLSRRGTYSRGGRGGAMGR
GGIA
NT seq
7575 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtgctgctgcaggtcctggagcggacggagttaaacaaactcccgaaaggc
gtccagaacaagctggagaagtttgtgacggagctgcagaatgctaacgaggcgctgaag
acactgcacgagcgcttcaaagcagacagtgagcagcagtactttgacatcgagaagaga
ctgtcagagagccaggaacagatcctgtcagccaccagagacttgcagaccctgaaggag
gaaaataagaaactcaatgaagagctgagtactctgaaaggaatagagggagataccttt
caagataaaacaccacagcagcagacaaagaccaagtatgagattgaggcagagaagagg
gagctggcgaggttgctggagaagagaacacatgaggtggagaaccttacacaggatgtg
aatcgtctaaacgagaagctgactgagacaaacaaagtgaagatggagctgcagttgaaa
ctggatgaaatacaatcatctgagacgtcgctacagcaccgggagaagcgtatggagcag
gagaaagaattactggagaagaaaattgagtggtcaaccgcagagctgaagaacaagacc
gatgaactgctcaacaccaacagagacaaaggcaaagagatactggagcttcagagtagt
ctgaagaacaccaaggagcaggtgaccacactggaaagtcagctcatttctttgaagcaa
accagtgaaagccaaagtaaaagagctgatgacctcaacaacaaactcaaacaggctaaa
gatgagcggagtgccatggaggagaaataccgcaatgagcttaatgctcatatcaagttg
tcttcactgtacaagggggcagcaacagatatggagacaaaaaaccaagaactttgcaga
gctgtggaagagctcagcaaagttgttaaagacaccggggaggccaataagactctggag
aagaaggtgtctgagggagcagaactgaagacgcggcttgaggcagagttgaaggaaaaa
atcaagaaaatggagaaagagctggaaaatgtcacaatgaaggcttctggtaaacactgc
tgtgtgccttctctgactgaggagcagctggaccacatgtgtccttcagcagctgccatt
gctgcgattgtaaagcctggcatgaagttctttgacctgtataatgcctatgcagagtgt
cagacgcatcttcagcttgagaaacaggagaccaacagagtgagccgagtgctggatgag
atcgtccaggaagtcgagtccaaagcgcccgtcctgaaacgtcagagacaggagtatgag
agcatgcaaaggtccatggcttccctgtgcaacaaactggaacaggctcgaatggaaatc
cacggtttgcaaaaagagaaagaagagaccaagcaacgctgtgaggcattggagagagaa
aaactgagggtagagagacagttagatgatacatctacacaggtgtgtgttcttctggcc
gagcttgaggaagccagaggtaatcgggtgatcaagactgacagcagctccgccgacatt
tctagcacctctgaagtcaacaacccacgccagttgtctttccgcagtgttgaagagctg
caaaagcagaaccagagccttctgggaaggctgagggagctggagcaggagaaggacaga
gagcagagccgtgtgacttcagcacgtgtgtctgaattggaggccagtgtggataaactc
cagaaggaggtggagcatctgagagagcagaggaaccagcagaaacagctggctgactcc
aacgccagacagagagacatgtacaaggccctgttgactcacagcactggcttcagcctg
cctcctcaaggtctagagtcctcatcccagcctgcacatgttcgtccttcagccccagga
actcgctctactccacaacgagctgctgccgtcgaggcagcacagagtactcaggctaaa
gctgctttaaaacagctcaacgatgccttcagtctgtataaaaaagagaaggcagagaac
gacaggatgctgaatgaaacaaacgacagactgcagagccagataacagaactcagctcc
agtcacgccaagctgacttctcaactggagttcagcaacaagaggtatgagattctccag
gagactgtatcagcctaccgcagagagatctctgcccttcaggacaggaaccaaaaaatg
tctgctacggcccaacgacacgagcacatcatccacacaatgacccaggacctgcggcag
gctaatgaaaaactgtcactggaagaggtgcgtgtagtgaacgtgaccaaagagagagac
atgttaagacaggcagagagtcgactgactcgagagaaggaagccatactggctgagcaa
cgtaaccagaacctacttctcaccaacctcaagacaatacagttgacaatggagcgagcg
gagacagagacccgccagcgactgaacaacaagatcgagcatctggaggcagagctagct
tccatgaagagcaggatggaccaggaagttgcacaaagacattccctcggacgaactatg
gatgctcagctgttagaagccaagaagcagcttgagacccagaacatcctgcagcagaga
accagggagttgttgcgcagctctgaacagcaggtggcaacactgaaaacacagctggct
tctgcttcatcctctgaggctgttaccagctccagcaacaccaccaccccagctaccaga
gctgcacccgtcagagctcaactgagagtacgccctcaagcgccagcagcctcccagcag
cctcccagccaatcagaacaggagattgcagaggtgagaggtcttctccgtactgctgag
gaacagaacagtgaactggcagagcagctgaagaatgccaatgctactgtggatcagtac
agagccgtggtactgactctggaagacagtctgaagaaagaaaaggagtcccgctccccc
ctggagatccgactgaaggagtcggaggaggtgcagaagcagctggagaagaggattgta
gaggtggagaagatgaagcagcgggagcaggatgaggggaggaaagctgtggacacggtg
gagaaacaagtgtgtgagctgcagcgcaatctgaagaccagtcagatggaacagcaggac
gcgctggagagagcagctgcttctcttacacaggagcagaaggccacacaagacagtctg
ctgcagactaagcttgctagtgaggcgcagtccaagtatgagcgggagttgatgcttcat
gctgctgatgtggaggctctgcaggagctcaagaaaagaattcaacaagacgtggcacag
aagagggagttagaggagcaaataaacaagacgtcctccctcctgcaggagaaaactgct
gcattgaacacactggagaaacagctgaaggatgacctgtctaatcagagtcggcgctgt
gaggagctggggaagcagaatgctctcttgcaccagcagatggatgacatggcctccaag
agtcgtcagcagcagcagcagcagcagttcgacctgtcattcagtgaggaaggaaagacc
actgaacagattctagaaatactcaggtttgtgcggcaggagaaacagatagctgtggct
cgatgtgaggtgtcggaaggagaaactcttcgctacaaacagcgagtggaacaccaagac
agagaacttaaggagcaacaggacaccctgaatgctgagaggcagaaaatgcaggctaca
gctaagactctggtccagcaagaagagcaactgaagaagatgagcactatcagtgctcta
caagaaaacaacaggatgctgaaaatgaacagagataagctgcagcaggagctgcaacaa
gcgcaggctaaagtgacaaagctgcagtcagacatcagtccactgcacaactctctgtct
ctgctgtcagaaaaaaatggctccctgcaggctgataggaggcttctggaagaagacctc
aaacactggaaggccaaagcacagctgctggccagccaacggaaagatggagatgttgag
gagaaacaaaaactgaccaatgagagagaagctcagcagagacgcatcgcacagctcgct
gaagagacagccaagctgaagactgaactggccagatccagtgccagcagtaactcaact
cagtctcagctgcaaggcctcagagactctgtggcccaacagatatcagagaaagaaact
ctgaagaaagacctggaaacaaaaagaactgagatcctggagaagaacaagaccatcacc
caggtgaagaagattggacgacgctacaagacgcagtatgatgagctcaaagtccaacat
gacaagctggttgcggaaacagcatctaaagcagggagtgaggcagctcctagtcaggag
gtgcagcaggagctggccaaagcccaggaggagcgcaacaaggccagagaggagctgaaa
acactgaaagaagatgtgcagaagaaacagcaagagacccacaaggccctgcaagagctg
gaggaggcgcaaaaggaaaaccagaagaccaaggaaaagtcccaggaggttcaaaaccag
attacaaagaaccagaaccaactcacacaattgcagtcccagttgtcgcagacccagtct
cagctgcagcagaatcagaaccagctgacccagagtcagaaagaacttcaacaagccaag
acccacacccagcaggtacaaaaccagttaaaatcagctcaaactcaagctcaggcccgt
cagagtcagaatcagctgctccagaaggagctccagcaggggaaagaagcgctccagcag
agcctcgccagtcagaaagagctgcaacagactcatcaaaccaatcaacaaagccacaac
caggaagtcggcaatctcaagaccactctaagccaatcagagggcaaggcgactgaactc
cagggacagctggacagtctgcagaagactgttggtgagcgtgaagcagacatcaagcgt
ctgcaggagcagctgaatgaagctaaccaggccaatgaagctagtcaagccacacaggcc
aagagtttccaggccagtgatactaacacagctggtgacaccaacaaggctcaacaagag
gaggttgctaaactcagacaagagcttttggactgtaagaacaaagaggagcagctgaga
cagcagatttctgataaagaagaaaagaccaagaaggccttcatgggagctaagaccaaa
atcagccagctcatcagtgccaaagagcagctcagtaaggagacagaagaactgaaacag
aacaaggaggagctggaggggagagtaaacgccctcaagtctcagtacgaaggtcgactt
cttcgcctggacagagagctgagagaactgagggagacacagtcacagtctgagcccaga
gaggagccacatgaccagagtggctctaaggtggtggatcagccgagatccacagaccag
agacagatatctttgaagagtccagcccaagacagaggaggctctagtctgtctgatcct
cccactgctaacatccgcccaaccccaagtactccatctcctagcaacaagcccagcccc
tcccctggcagcaaggccacaccccgggccagtatccggcctatggttaccccggcaact
atcccaatcccgacacctaccgccaccgtcatgccaaccacacaaactgacagtcaagag
gtgcaaattagcacaggagtctgtgtacactccaccacctccagtctggtgagcgcaccc
acctccataactcaaccaaccagcttacaagccacagcttttgttcagcccacccagcag
caggcagccagtcaggaagcagggtccagcatggacacagagcgaccatccacgtcctct
tctgtgattggtgcagcaggttcaaagcgagccagagaggaggaggaggaggagcaggag
gaggaagaagaggagagcagaccggagagttcccacacatcaccgaccactaaaaaacta
cgactaaaaccatcattagcactggagatggaaggtgatgaggagatggaaggagaactg
agggatgagggggaacaacaggattcaccagatgacagtcaggagcttccagaagagggt
ttccccattttagctgaagatgaggaggacattgaagaagaaggcgtgtcccagtctgtc
ccctcttaccaaatgtcgtctcagggctccactataatccgagatgtcattgtgatcgac
acagacagtgaaagccgagagagcaaagatggggaggagaagcaggaggacgaagaggaa
gaggaggaggaggaggaaggagatgagtataaggaggaagaggaggatgatgaagatgag
gatgatgctggtgatggtgagatgaggggaggagatgaaagtaatgagaggagcggggct
gaagatgagggagaggaggaagatccatcagaagccaccaacgctgaggaggatgtgggt
ggagcgtcgtcagactcccagcatgcctctgagccgccgcagagcagtgaaggcagcagc
agcgccacatcagagtctgaccctgtccgagaccttgtacacctccccccaacttcctcc
tctatatcctcaccctcctcctcccttacaccccgcttgccacacccccgtaggcccaca
cactccctcccaccaaggctttacatccaacctccggctccagagctgggacccccacac
atgcagagacagtcctctcagctccgtagaacatcagtaggacgtggacttcaactcacc
cctggaatcggcagtacacaacatttctttgatgacgacgacagaatggttcccagtact
cccactctggtggtcccacaccgcactgatggctttgctgaggctatacattctcctcag
gtagcaggtctctctaccaggtttagatttggtcctccggaagacctgctgcctcaaaca
tcagcgtcacactctgacctgggacaactggcctctcaaggaggtttgggtatgtatgag
tctcctctgttcctggctgctcatgatgaagatggaggaggaaggagtgtccctaccacg
cctttacaagtggctgcaccagtgacagtcttcaccgagtcgctgccttcagacagtggt
gacaacatggcctcacagtctgttcccatggtcacagcctccacggggatggcttccgct
gcagatgatatagatgaggtgttcgtggagcaagaagcagagggacctggtattgagtcg
tctttggaaagccagacagacatggagtcaacagggcagcagagtgatgatgcatcactg
ccatctaccagccaagaccccgacaccagcagtgttactcagcggcgtatgatgagcagc
caatccctgatcagcagcctgtcaggcagaggaaccagaggagggaggggggaagccagg
atgttcctcagccgcagagggacttactctcgtggaggaaggggaggagccatgggcaga
ggaggcattgcctaa
DBGET
integrated database retrieval system
