Hippoglossus hippoglossus (Atlantic halibut): 117777912
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Entry
117777912 CDS
T07778
Name
(RefSeq) polypyrimidine tract-binding protein 2-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hhip03041
]
117777912
Spliceosome [BR:
hhip03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117777912
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
117777912
NCBI-ProteinID:
XP_034468903
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All DBs
Position
17:complement(3069272..3088806)
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AA seq
523 aa
AA seq
DB search
MDGDVAVGVKRGSDELNMYGSSPSSMTANGSDSKKQRLDESPPSRVLHIRKLPSEVSETE
VIALGLPFGKVTNILMLKGKNQAFLELGTEEAAITMVNYYTAVTPQVRNTPVFIQYSNHK
ELKTDSALNQRAQAVLQAVTAVQDGSSPSSDPGVLDLTPPPSPVLRIIIDNMFYPVTLDV
LQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYNSCCTLRIDFSK
LVNLNVKYNNDKSRDYTRPDLPTGDGETTNKDHSLLGTPSGALASYSSGGGYSSSLSLSQ
GGGAISPLSAAAAAAAAAGRVALSGSGVSGVLLASNLNDEMVTPQSLFTLFGVYGDVQRV
KILYNKKDSALIQLSDGNQAQLAMSHLNGQKVFGKVMRVTLSKHQTVALPREGLDDQLLT
KDFSGSPLHRFKKPGSKNFQNIFPPSATLHLSNVRDGVGEDDLRLLFSNSGGTVKAFKFF
QDRKMALIQMSSVEEAIQALMDLHNYDMGGNHHLKVSFSKSTI
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggacggagatgtcgcggttggtgtgaagagaggctcagatgagctcaacatgtatggt
agcagtcccagctctatgaccgcgaatggcagtgacagtaagaaacagcgcctagatgaa
tcacctccctccagagttctccacataaggaaacttcccagtgaagtgtcagagactgaa
gtcattgctttgggcctcccctttggaaaggtcaccaacattctgatgctcaaggggaaa
aaccaggcgtttctggagttgggtacagaggaagcagccattactatggtgaactactat
acagctgtcacaccacaggtcagaaacacacctgtcttcatccagtactccaaccataag
gagctgaaaacagattctgctctaaaccagagggcccaggcagtactgcaggcagtgaca
gcagttcaggatggaagttctccatcttctgacccaggagttctggaccttactccaccc
cccagccctgtcctgcgaattattattgacaacatgttttatcctgtgacactggatgtt
ctccaacagatcttcagcaaatttggcaccgtaatgaagattataaccttcaccaagaac
aaccagtttcaggctcttcttcagttcagtgaccctgtcaatgcacagcaagctaaactg
tctttggatggacagaacatctacaattcatgttgcactctgcggatagacttcagtaaa
ctggtcaacctcaatgtcaaatacaacaatgataagagtcgagattacaccagacctgac
cttccaactggggacggagagacaaccaacaaggatcattctctcttgggtaccccatct
ggagccctagcttcctactcgagtggaggaggttactcatcttctctctccctctcacag
ggtggaggagccatcagtcctctgagtgctgcagcagcggcagcagcagctgcaggtcgc
gttgctctctctgggtccggagtgtcaggagtcctgttggcctccaacttaaatgacgag
atggtcacgcctcaaagtctctttaccctcttcggtgtctatggcgacgtgcagagggtg
aagatcctctacaacaaaaaggacagtgctctgatccagctgtctgatggcaaccaggct
cagctggctatgagccatttgaatggtcagaaggtgtttggtaaagtgatgagagtgaca
ctgtcaaaacatcaaactgtggctttacccagagaaggactggatgatcaactactaact
aaagatttctctggctctccactccaccgctttaagaagccaggatccaagaacttccag
aatatctttcctccctctgcaacacttcatctctccaacgtccgggatggtgttggagag
gatgatcttcgtcttctgttctctaacagtggaggaactgtcaaggccttcaagttcttc
caggaccgtaagatggccttgatccagatgtcgtcagttgaggaggcgatccaagcactg
atggatcttcacaactatgacatgggagggaatcaccatctaaaagtttccttttcaaag
tccaccatctaa
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