Hippoglossus hippoglossus (Atlantic halibut): 117778073
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Entry
117778073 CDS
T07778
Symbol
cpdp
Name
(RefSeq) deoxyribodipyrimidine photo-lyase isoform X1
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhip03400
]
117778073 (cpdp)
Enzymes [BR:
hhip01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
117778073 (cpdp)
DNA repair and recombination proteins [BR:
hhip03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
117778073 (cpdp)
Prokaryotic type
117778073 (cpdp)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
117778073
NCBI-ProteinID:
XP_034469213
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All DBs
Position
17:8760666..8766534
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AA seq
554 aa
AA seq
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MFCIWRSSPSAQRRPLTLTYQRSPRPLLSLFTGSFSSVSTMSDKKRKAAPASKERSAKQK
KLAPTKQQEKQEEKQQRTGGWLQDLIMQQRSEEKEIKFNKKRLRILSDAEKMKQGSEGVL
YWMSRDQRVQDNWALIHAQKLAVKKNLPLHVCFCWFVPKSELSTLRRYSFMLKGLKEVAE
ECKALDIQFHLLHGSAGDVLPGFVSDHNLGAVVTDFYPLREPLQWLEDVKEKLPEDILLK
QVDAHNIVPCWVASPKQEYAARTIRGKITKLLPDFLTDFPPVEKHPVPATRTAKPIEWEK
TLASLPVDREVEVPEWAKPGTKAGMAMLESFIDVRLKLFENKRNDPNVSALSQLSPWIRF
GHISAQRVALQVQSSGQKAGQTVASFIEELVVRRELTDNYCYYNKKYDSVEGAYEWAQKT
LKDHAKDKRPYLYTREQLEKAKTHDKLWNGAQYQLITEGKMHGFLRMYWAKKILEWTSSP
EEALSIALYLNDRYSLDGQDPNGFVGCMWSICGIHDQGWAERPIFGKIRYMNYKGCTRKF
DVPQFERKYCPKNL
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgttctgcatctggaggagctctccctctgcacaaaggcgacccctgacgctcacctac
cagagatcaccaaggccacttctctccctcttcaccggttcgttctccagtgtttccacc
atgtcagataagaaacgcaaggctgctcccgccagtaaagagcgctccgccaagcagaag
aagctggcccccacgaagcagcaggagaagcaggaggagaagcagcagaggactgggggc
tggctgcaggacctgatcatgcagcagaggtcagaggagaaggagataaagttcaacaag
aagcgtcttcgaattctatctgacgctgagaagatgaagcagggctcagagggagtcctg
tactggatgtcgagagaccagagagtacaagataactgggctctgatccacgcacagaaa
ctcgctgtgaagaaaaaccttcctctgcacgtctgcttctgctggtttgtcccaaagtca
gaactgtctactctgagacgttacagcttcatgctcaaaggactgaaagaagtcgcagag
gaatgtaaagccttagacatccagttccacttactccatggatcagcaggggacgttctc
cccggctttgtgtctgatcacaacctgggggcagtggtgacagacttctaccctctcaga
gaacctctgcagtggttagaggacgtcaaagagaagcttcctgaggacatcctcctcaaa
caggtggatgcccataacattgttccctgctgggtagcgtcacctaaacaggaatacgcc
gccagaacgatcagaggaaaaatcaccaaacttctgccggacttcctcactgattttcct
ccggtagagaaacaccccgtccctgctacaagaactgctaaaccaatagagtgggagaaa
actctggcctcgctgccggttgacagagaggtcgaggtgccggagtgggccaagcctggc
accaaggcggggatggccatgttggagtccttcattgatgtacgcctcaaactgtttgaa
aacaaacgcaacgacccaaatgtcagcgccctcagccagctctccccctggatccgcttc
ggccacatctcagctcagcgcgtggcgttgcaggttcagagcagtgggcaaaaggccggt
cagaccgtcgcctccttcatcgaggagctggtggtgcgtagggagctgacggacaactac
tgctactacaacaagaaatacgacagcgtggagggtgcatatgaatgggctcagaagacc
ttgaaggaccacgccaaagacaagaggccttatctctacacacgggagcagctggagaaa
gcaaagacgcacgacaaactctggaatggagctcagtaccagctgatcactgaagggaag
atgcatggtttcttgaggatgtactgggccaaaaagattctggagtggacatcgtcacca
gaggaggcgctctccatcgccctttatctaaatgatcgctattcgctggatggccaggac
cccaatggttttgttgggtgtatgtggtctatctgtggcatccacgaccagggctgggca
gagagacctattttcggaaagatccgctacatgaactacaaaggctgcaccaggaagttt
gacgtcccccagtttgagcgaaagtactgtcccaaaaacctgtga
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