Hippoglossus hippoglossus (Atlantic halibut): 117778295
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Entry
117778295 CDS
T07778
Symbol
sec22ba
Name
(RefSeq) vesicle-trafficking protein SEC22b-A
KO
K08517
vesicle transport protein SEC22
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04130
SNARE interactions in vesicular transport
hhip04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
117778295 (sec22ba)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117778295 (sec22ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117778295 (sec22ba)
Membrane trafficking [BR:
hhip04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
117778295 (sec22ba)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Sec20
IMD
Motif
Other DBs
NCBI-GeneID:
117778295
NCBI-ProteinID:
XP_034469673
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Position
17:9117307..9120510
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AA seq
215 aa
AA seq
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MIVLTIIARVSDGLPLSASVQEDEQSGRDLQHYQGQAKQLCRKLNAQSPDRCTLEAGDMN
FHYLIAQGVCFLTLCEASFPKKIAFAYLEDLNNEFHDQYGKKVPKVTRPYSFIEFDTYIQ
KTKKMYADSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDTKASNLTTLSKKY
RSDAKYLNTRSAYAKVAAVTVFLFTLIIYVRFWWL
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgattgtactcacgatcatcgcgcgtgtgtcggacggactcccgctgtctgcgtccgtg
caggaggatgaacagtccggcagagacctgcagcattaccagggccaggccaagcagctg
tgccgtaaactgaatgcccagagtcccgaccgctgtaccctggaggccggagatatgaac
tttcactacttaatagcacagggagtgtgcttcttgaccctctgtgaggcttcattcccc
aaaaagatagctttcgcctacctcgaggacctcaacaacgagttccatgaccagtatgga
aaaaaggtgcccaaagtgacaaggccatactctttcatcgagtttgacacatacatccag
aaaacaaagaagatgtacgctgacagcagagccaggaggaacctgggcagcatcaacaca
gagctgcaggatgtgcagagaatcatggtggccaacattgaggaggttctgcaaagagga
gaagctctgtctgctctggacacaaaggccagcaatcttaccaccctgtcgaagaagtac
cgcagcgatgccaaatacctcaacacccgctctgcgtatgccaaggtggctgctgtgaca
gtgttcctcttcacactcatcatctacgtgcgtttctggtggctctga
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