Hippoglossus hippoglossus (Atlantic halibut): 117778351
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Entry
117778351 CDS
T07778
Name
(RefSeq) guanine nucleotide exchange factor VAV3-like isoform X1
KO
K05730
guanine nucleotide exchange factor VAV
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04510
Focal adhesion
hhip04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117778351
09142 Cell motility
04810 Regulation of actin cytoskeleton
117778351
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
CAMSAP_CH
SH3_1
SH3_2
CH
SH2
SH3_9
C1_1
PH
CDC24
SRA1
Filamin
Motif
Other DBs
NCBI-GeneID:
117778351
NCBI-ProteinID:
XP_034469745
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All DBs
Position
17:19282864..19330504
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AA seq
836 aa
AA seq
DB search
MEHWRQCAVWLIGCNVLPVNHRVTADTAQVFDLAQTLRDGVLLCQLLNNLRPLTINLKEI
NLRPQMSQFLCLKNIRTFLTSCCDVFGMKKNDLFEAFDLFDVRDFGKVMDTLSLLSYTTV
AQQAGFKPFPMEESLKDEDIYNNLEDLIDENALEDEDDLYAVVYGLEEDYAGGEIYEDLM
RAEQHPPLKQAEVDVRICCLTEIKQTEEKYTETLESIEKYFLNPLMKFFSAAEIDKVFLN
IPDLVKVHKSLMVDVQDSILNKNALNLYQIFLSYKERLLIYGIYCSRVEIAIAVLDLICK
EKEDVRLKLEECSKRANNGKFTLRDLLVVPMQRVLKYHLLLQELVKHTHDAADKSNLRIA
LDAMKDLAQYVNEVKRDNETLREIDQYQRSIENLNQPLITFGRPKGDGEVRMISNVDKRK
QDRHIFLFDVAVIVCKRRGDNYEMKDVLDLNYFKITNNPTSDKEGKKWCYGFYVTHQQGY
TGFELFFKTRELKKKWLDQFEMAISNIRPEKANHNSHQFKMHTFERITSCCFCHLLLRGI
FNQGYLCIKCGLGAHKECLGRLGVCGRTDLAKPKPKENSAPPDPGLPRMVVIRDYGGIPY
PQYGPPLSIHVGDVIEVMFADLHSSWWQGKILATSKIGFFPSDAVRPCPCVPKPVDYSAQ
LWFAGPVERYQAEEELLDRGNGTYLVRHRSKEGTEYAISIKFNDKIKHIKILTKDGCFYI
AETRLFKTVLDLVEHYQQHSLKEGFSSLDTTLQVPYRELTNGIMPMAVTKADSVFSPRVV
GVAVARYDFCSRDTRELSLLQGDIIKIYTKMTSGWWKGEMGGKVGWFPSTYVEEED
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggagcactggaggcagtgcgcggtttggctgatcggctgcaacgtgctgcccgtgaac
caccgggtgaccgcggacacggcgcaggtgttcgacctggcgcagaccctgcgggacggg
gtgctgctgtgccagctgctgaacaacctgagacccctcaccatcaacctgaaggagatc
aacctcaggccgcagatgtcacagttcctgtgcttgaagaacatccgcacgttcctgacg
tcgtgctgcgacgtgtttgggatgaagaaaaacgacttatttgaagcctttgatctcttc
gacgttcgagacttcggaaaggtcatggacacgctgtctctgctctcgtacacaacagtt
gcacagcaagcaggattcaagcccttcccgatggaggagagcctaaaagacgaggacatt
tacaataatctggaggacttgattgatgagaatgcccttgaggacgaggacgacttgtac
gcggtggtctacgggctggaggaggactacgcaggtggagagatctatgaagatctcatg
agggctgagcagcatcccccactgaagcaggcggaggtcgacgtgcggatctgctgcctg
acggagatcaaacagacggaggagaagtacacggagacgctggagtccatcgagaagtat
ttcctgaatccactgatgaagttcttctctgcggctgaaatcgacaaagtctttctcaac
attcctgacctggttaaagttcacaagagcctgatggtggacgtgcaggactccatcctg
aacaaaaacgccttaaatctctaccagattttcctcagctacaaagagaggctgctcatt
tatggcatctactgcagtcgggtggagatcgccatcgctgtgttagacctcatctgcaaa
gagaaggaggacgttcgcctgaagctggaggaatgctccaaaagggccaacaatgggaag
tttaccctgagggacctgctggtggttccgatgcagagagtcctgaagtatcatctgctt
cttcaggagttagtcaagcacacccacgatgctgcagacaagagtaacctgaggatcgct
ctcgacgccatgaaagacctggctcagtatgtcaacgaggtgaagagggataatgagacg
ctcagggagatcgaccagtaccagaggtccatcgaaaacttgaatcagcctctcatcacc
tttggtcggcccaaaggagacggagaggtgcgcatgatctccaatgttgacaagaggaaa
caagacagacacatctttttatttgacgtggccgtcattgtttgcaagagacgaggagac
aactacgagatgaaggacgtgctcgacctcaactacttcaagatcaccaacaaccccacg
tctgacaaggaggggaaaaagtggtgctacgggttctacgtgactcaccagcaggggtac
acaggctttgaactcttcttcaagaccagagagctgaagaagaagtggctggatcagttc
gaaatggccatatcaaatatccgaccagagaaagccaaccacaactcccaccagttcaag
atgcacacgtttgagaggatcacatcctgttgcttctgtcacctcctgctcaggggcatc
tttaaccagggctatctctgcatcaaatgtggtctgggggctcataaggagtgtttgggt
cgactgggagtgtgcgggagaacagatttggcgaagccgaaacccaaggagaactcagca
ccaccagacccaggtttacccaggatggttgtgatcagagactatggtggcatcccttat
ccccagtacgggcccccactaagcattcatgtgggggatgtcattgaagtgatgtttgca
gacctgcacagctcctggtggcagggcaaaattctggcgacgagcaagattggcttcttt
ccaagcgacgctgtgaggccctgcccgtgtgttccgaaacctgtcgattactccgcccag
ctctggtttgcagggcccgtggagagataccaggctgaggaggagctcctggacagaggg
aacggcacctatctggtccgacaccggagtaaagaaggcaccgagtacgccatcagtata
aagttcaacgataaaatcaagcacattaagattctgaccaaggacggctgcttttacatt
gctgagactcggctgttcaagactgtgctggacttagtggagcactaccagcagcactcc
ctgaaggagggcttcagcagtctcgacaccactctacaggtcccctatagggaacttacc
aatggaatcatgcccatggccgttaccaaagctgacagtgtgttttcccccagggtggtg
ggtgttgcagtggcacgctacgacttctgctccagagacacacgggagctctcactgctg
cagggagacattatcaagatctacaccaagatgaccagtgggtggtggaagggagagatg
ggcggcaaggtgggctggtttccctccacctacgtggaagaagaggactga
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