Hippoglossus hippoglossus (Atlantic halibut): 117778476
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Entry
117778476 CDS
T07778
Symbol
aire
Name
(RefSeq) autoimmune regulator
KO
K10603
autoimmune regulator
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117778476 (aire)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhip03000
]
117778476 (aire)
04121 Ubiquitin system [BR:
hhip04121
]
117778476 (aire)
Transcription factors [BR:
hhip03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
SAND domain-containing proteins
117778476 (aire)
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117778476 (aire)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSR
PHD
PHD-1st_NSD
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
117778476
NCBI-ProteinID:
XP_034469947
LinkDB
All DBs
Position
17:complement(13762275..13768116)
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AA seq
488 aa
AA seq
DB search
MSRVEAFRDTNLRSLLRESRTDIAMAVDDPFPLVYGLADKNIITDQMLKDTLEKESREGI
HKAMYSLLSWVLEQRRSTIQAFWRNMSKDYNLDSYSKLQTLLSNLHSKRDAAGSRGEKRS
PRCDKTPHVKKRSHDDRETGSSKISHYHAKTSDGPGGKVKLYRVKNEAPAPQLTSGNSVQ
VVSSSVQGGVTLSSSSSSTELSVSHEAREKIHIKQVFGSDGTRKCIKEDTSAELKFKAAK
STFHHKGGTTTGMKVHYNDDECAVCKDGGELLCCDGCPRALHLTCLDPPLTTIPSGSWQC
EQCRGVKREKDQLTLQAVVAQPQQTNTNTNTFIDASFFSSLSSSSLTSVTASVNGPAARN
QCSGLDSVREVCGLCRLGGDLTQCLQCLGRFHVHCLFSKGRSICSSCSSCSRPWGSSAEK
EAEPRGSQLTPAVQNTLSHDQITSAPEPILHTAELDSILGDQGSMDGILQWAFHNISRPL
PDSQGCYQ
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtccagagtggaggctttcagggacacgaaccttcgctcattactgagggagtcgcgc
accgacattgccatggccgtggacgaccctttccctcttgtctatggtttggcagacaaa
aacatcatcactgaccaaatgctcaaggacacgttagagaaggaaagtagggaggggatc
cacaaggccatgtactcgctcctgtcctgggtcctggaacagagaagatctaccatccag
gccttctggagaaatatgagcaaggactacaacctggacagctacagcaagctgcagaca
ctgctctctaacctgcactccaaacgagacgctgcaggttccagaggtgagaagagatcc
ccgagatgtgacaaaactcctcacgtgaagaagaggagccatgacgatagagagaccggc
tccagcaagatttcacactatcatgcaaagacaagcgacggtccagggggtaaagtaaag
ttatacagagtgaagaatgaagctccagcacctcagctaacatctggaaatagtgtgcag
gttgtgtcctcctcagtccagggaggagtcaccctctcctcctcctcttcctccactgag
ctgtcagtcagccatgaagccagagaaaagatccacatcaagcaggtgtttggctcggac
gggaccagaaagtgcattaaagaggacaccagtgcagagctcaagttcaaggctgctaag
agcacatttcaccacaagggggggacaaccacaggcatgaaggttcattacaatgacgat
gagtgtgcagtgtgtaaggacggaggggagctgctctgttgcgatggttgtcctcgagcg
ttacatctgacctgcctcgaccctccactcacaaccataccaagtggcagctggcagtgt
gagcagtgccgtggagtgaaaagagagaaagaccaacttactttacaagctgtcgtggct
cagcctcagcagacaaacaccaacaccaacaccttcatagacgcctccttcttctcctcc
ctgtcgtcctcctccctcacaagtgtcacagcttctgtgaatggacccgctgccagaaac
cagtgctcaggtctggacagcgtgagggaggtgtgtggcctgtgccgtctcggaggagac
ctgactcagtgcctccagtgtttggggcgtttccacgtgcactgcctcttctcaaaaggg
agatccatctgctcgtcctgctcgtcctgctccagaccctggggcagctctgcagaaaaa
gaggctgaacccagaggctcacagctcaccccagcggttcaaaacacactcagtcatgat
cagatcacctctgccccggagcccatcctccatacggccgaactggactccatcctggga
gatcagggatccatggacggcatcttgcagtgggcttttcacaacatctcccggcctctt
ccagactcacaagggtgttaccagtga
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integrated database retrieval system
