Hippoglossus hippoglossus (Atlantic halibut): 117778499
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Entry
117778499 CDS
T07778
Symbol
clcn2a
Name
(RefSeq) chloride channel protein 2a isoform X1
KO
K05011
chloride channel 2
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hhip04040
]
117778499 (clcn2a)
Ion channels [BR:
hhip04040
]
Chloride channels
Chloride channel (CLC)
117778499 (clcn2a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
117778499
NCBI-ProteinID:
XP_034469996
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Position
17:complement(13915366..13953232)
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AA seq
1088 aa
AA seq
DB search
MHRKRRQNMFSEQIIKNQSNHSNHKCYMKLCAGQLNRCGKGHDGIAVTLPRKRHGKEVTV
ARQTGERRTDGRLQMYGRYTQELGVYAKEEAARLRDGGGVRDGKGLRRNTSVRSRAADLL
DYEKDPCAKCKLCASRCQKFLISRVGEDWIFLILLGLLMALVSWVMDYAIAFCQDAQKWM
YGGLDSNMLLQYIAWVTYPVVLITFSAGFTQILAPQAVGSGIPEMKTILRGVVLKEYLTF
KTFVAKVIGLTCALGSGMPLGKEGPFVHVASLCAALLSKFMAALFGGIYMFKMEEPFEGS
KNELRNTEMLSAACAVGVGCCFAAPIGGVLFSIEVTSTFFAVRNYWRGFFAATFSAFIFR
VLAVWNQEEETITALFKTRFRLDFPFDLQELPAFAILGIACGFGGALFVYLNRLIVECMR
KQKTINKFLLRKRLVYPALVTLLISTLTFPPGFGQFMAGQLTQHESLVALFDNRTWCRQG
VAEEFDYISHHHAWKHPQVNVFVTLVLFIIMKFWMSAVATTMPVPCGAFMPVFLIGAAFG
RLVGEIMATMFPDGIHADGSVYPIVPGGYAVVGAAALSGAVTHTVSTAVIVFELTGQISH
ILPVMIAVILANAVAQSLQPSLYDSIIRIKKLPYLPELGMGHHEKYNIRVEDIMVRDVRF
ITLNSCYRDLQEMLLTGQLKTLALVESRESMILLGSIERLQLQSLLSLQLGRQRRLEYLH
ELAQDNGTHDHLPSLTTDSTPSSPCTHVNSSGSARQGVRFLVSIQQISTEESSSFSPVAS
NIQLPLKSALKTVSAISDTETPNSSQTLSCADQDKELLESPVGPAPPEKRKPKRVRISMA
DSTEVEDCMTLTEIAEWEEQQLDEAVDFKNCKIDPAPFQLVEQTSLHKTHTIFSLLGLDH
AYVTSMGRLVGVVSLKELRKAIEGSVTVTGVKVRPPLASFRDSGNSTNVSEVTELHKLCI
RHRGLSLPREPNPPEAVDQPDLQYNEIPVNFSDQTNLQFETSPGDLTNQSSELVLQESPS
FTEDQSEFTFDCSPSHTEESELACDYDPPTHTPEPDETEQQHDPPSPNMDQSELEGESSP
AHKEDLSE
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgcacagaaaaagacgacaaaacatgttttcagaacaaatcattaaaaaccagagtaac
cactcaaatcataaatgctacatgaagctctgtgcagggcagctgaaccggtgtggaaag
ggtcatgacggcattgcagtcactctgccaaggaagagacatggaaaagaggtgacagta
gccagacaaacaggtgagagacggactgatgggagactacagatgtatgggcggtacacc
caggagctgggtgtgtatgccaaggaggaagcggcccgcctgcgggatggaggaggagtg
cgggatggaaaaggactgcggaggaacaccagtgttcgcagtcgtgctgcagatctgctg
gattatgagaaagacccctgtgctaagtgcaagttgtgtgcgtctcgctgccagaagttc
ctgatctcgcgggtgggggaggactggatcttcctcattctgctggggctgctcatggct
ctggtcagctgggtcatggactacgccatcgccttctgccaagacgcacagaagtggatg
tatggtggactggacagtaacatgcttctgcaatacatcgcctgggtcacctaccctgta
gtgctcatcactttctccgcgggattcacacagatcctggcgcctcaggctgtgggttca
ggcattcctgagatgaagacgatactgaggggggtggtcctgaaggagtatctgaccttt
aagacatttgtggccaaagtcatcggcctgacctgcgccctgggcagcgggatgccactg
gggaaggagggacccttcgttcatgtcgccagcctgtgcgcagctctcctcagcaaattc
atggccgctcttttcggagggatttacatgtttaaaatggaagagccctttgagggaagc
aagaacgagttgagaaacacggagatgctctcggctgcctgtgcagtgggtgtgggctgc
tgcttcgctgcccctattggaggggtgctgttcagtattgaggtaacatcaacgtttttc
gccgtgaggaactactggaggggcttcttcgctgccaccttcagtgccttcatcttcaga
gtgctggccgtgtggaatcaggaggaagagaccatcaccgctctcttcaagacccgcttc
cgtctggacttcccgttcgaccttcaggagctgccagcgttcgccatcctcgggattgcc
tgtggttttggaggtgctctgtttgtctacctgaaccggctgattgtagagtgcatgagg
aaacagaagaccattaacaagttcttgctgaggaagcgtctggtgtatcctgcactcgtc
accctgctcatctccacgctcacgttccctccaggcttcgggcagttcatggctggacag
ctgacgcagcacgagtctctggtggcgctgttcgacaaccgcacgtggtgccgtcagggc
gtggccgaagagttcgactacatcagccaccaccacgcctggaaacacccgcaggtcaac
gtcttcgtcacactagtcctcttcatcatcatgaagttctggatgtcagctgtggccacc
accatgcctgttccatgtggggccttcatgccagtttttcttattggggcagcgtttggc
agacttgttggagagatcatggcaaccatgtttcctgatggcatacatgctgacggcagc
gtgtatcccatagtgcctggcggttatgctgtagttggtgctgcagcgctgtctggagca
gtcacccacactgtatccacagcggtcatagtgtttgagctgaccggtcagatctcccac
atcctgcctgtgatgatcgccgtcattctggccaacgccgtggcccagtcgctccaacca
tctctgtacgactccatcatccgcatcaagaaacttccttatctgcccgagctgggcatg
ggacatcacgagaaatataatatccgtgtggaggacatcatggtcagggacgtgcgcttc
atcactctgaactcctgttatcgggacctgcaggagatgctgctgacaggtcaactcaaa
acactggccctggttgaaagcagagaatccatgatcctgctgggctccattgagcgactg
cagctccagtctctgctctcgcttcagctgggacgccagcggaggctggagtacctccac
gagctggcccaggacaacggcacacacgatcacctgcccagcctgacaactgacagcacc
cccagctcaccctgcacccacgtcaactcgtcgggcagcgctcgccaaggggtccgcttc
ctggtgagcatccaacagatctccacagaggagtcttcctccttcagcccagtggcttcc
aatattcagcttcctctgaaatctgccttgaaaactgtgtctgccatcagtgacacagag
acgccaaatagttctcagacgctctcctgtgcggaccaagacaaggagctgctggagagc
ccggttgggccagctcctcctgagaagaggaagcccaaacgagtgaggatctccatggcg
gactcaactgaagtagaagattgtatgactctaacagagatagcagagtgggaggagcag
cagctcgatgaagcggtggatttcaaaaactgcaagattgatcctgctcccttccagctg
gtggagcaaacatctctgcataagactcacaccatcttctctctgctgggtctggatcac
gcctatgtgaccagcatgggacgtctggttggagtggtctctctcaaagagttgcgtaag
gccatcgagggctcagtgacagtgactggagtgaaagtgcgccctccgttggccagtttc
cgtgacagcgggaacagcacaaacgtatctgaggtaactgaactacacaagctgtgcatc
cgccacagggggctctcgttgccccgggaacccaacccccctgaagctgtggaccaaccc
gatctccagtacaacgagatccctgtcaacttctcagaccaaaccaatttgcagtttgaa
accagtcccggcgaccttacaaaccagtcgtcagagttggtgctccaggagagtccctca
ttcacagaggaccaatcagagttcacttttgactgcagcccctcccacactgaggaatca
gagcttgcctgtgactatgacccgcccacccacactcctgagccggacgaaacagagcaa
caacatgacccgccatctccgaacatggaccaatcagaacttgagggagagagtagcccc
gcccacaaggaggatctgtcagaatga
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