Hippoglossus hippoglossus (Atlantic halibut): 117778636
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Entry
117778636 CDS
T07778
Name
(RefSeq) lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase A-like
KO
K03766
beta-1,3-N-acetylglucosaminyltransferase 5 [EC:
2.4.1.206
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip00601
Glycosphingolipid biosynthesis - lacto and neolacto series
hhip01100
Metabolic pathways
Module
hhip_M00070
Glycosphingolipid biosynthesis, lacto-series, LacCer => Lc4Cer
hhip_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
117778636
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
hhip01003
]
117778636
Enzymes [BR:
hhip01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.206 lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase
117778636
Glycosyltransferases [BR:
hhip01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
117778636
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Fringe
B3GALT2_N
Motif
Other DBs
NCBI-GeneID:
117778636
NCBI-ProteinID:
XP_034470241
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All DBs
Position
17:8920675..8926912
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AA seq
387 aa
AA seq
DB search
MFLRFRRLRRCQCVQLMTTCLVLSVVMVCWEQLDNSVVSHVKSYSYRYLVNRFSYINKSF
TIPREQARSFSNFRYLLDHPDKCANKDVLLLLFVKTSPGNTERRKAIRSTWGNETYIQNT
LGVTVRVVFALGAPRTKTEEPSWRKRSRVGLQEQLIHEDRLHGDLIQQDFLDSFHNLTLK
LILQFHWMHSRCAHARFLMTADDDIFVHMPNLVSYLQDMSSRGVTNFWIGRVHRGAPPIR
RKDSKYYVPFEMYPWLSYPDYTAGAGYVVSSDVADKIYQATLTLNASLYIDDVFMGICAN
AVGVTPQDHVYFSGEGKAPYHMCIYDQMMTSHGHVENIYDLWKAATHPQVKQWTSGVVGR
LYCTAVKMALLCKPYYVNTYPCKAAFL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgaggttccgccgattacggagatgccaatgtgtgcagctgatgaccacctgc
ctggtgctgtcagtggtgatggtctgctgggagcagctggacaacagtgttgtcagtcac
gtcaagtcctactcctaccgctacctggtcaatcgcttctcctacatcaacaagagcttc
accatcccacgtgagcaggcaagaagcttcagcaacttccgctacctgctggatcacccg
gacaagtgtgctaacaaggacgtcctcctcctgctctttgtcaaaacgtccccagggaac
actgagaggcgtaaagccatcagatccacctggggtaatgagacctacatccaaaacacc
ttgggagtgactgtcagggtggtgtttgccttaggagcgcctcggaccaagacggaagag
ccttcttggaggaaaaggagtagggtgggcctccaggagcagctcatccatgaggaccgt
ctccatggtgatttgatccaacaggacttcttagactctttccacaacctgaccctaaag
ctgatcctacagttccactggatgcacagccgctgtgcacacgcccgcttcctcatgact
gccgacgacgacatcttcgtccacatgcccaacctggtgagctatctgcaggacatgagc
agcagaggagtcacaaacttctggatcggtcgagtgcacagaggggcaccgcccatccgc
agaaaagacagcaagtactacgtgcccttcgagatgtacccgtggttgtcgtatcctgac
tacacggcaggggctgggtatgttgtctccagcgacgtagcagacaaaatctatcaggcc
acactgaccctgaacgcctctctttacatagacgatgtgttcatgggcatctgcgccaac
gccgtcggtgtgaccccacaagatcatgtctatttctcgggggagggcaaggcgccttac
cacatgtgtatctatgaccagatgatgacctcacatggtcacgtggagaatatctatgac
ttgtggaaggccgcgacacacccacaggtgaaacagtggacctctggagtcgtaggtagg
ctgtactgcacggccgtgaaaatggctcttctttgtaaaccttactatgtcaacacatac
ccctgcaaagcagcctttttgtag
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