Hippoglossus hippoglossus (Atlantic halibut): 117778665
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Entry
117778665 CDS
T07778
Name
(RefSeq) cadherin-12-like isoform X1
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hhip04515
]
117778665
Cell adhesion molecules [BR:
hhip04515
]
Cadherins
Major cadherins
117778665
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
117778665
NCBI-ProteinID:
XP_034470287
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Position
17:2493203..2575034
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AA seq
880 aa
AA seq
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MSISTLEEAIFLKFTVAYFFLSHQHSLMITREYVTLVLVGSCFLLDYSSQSSQLQSRTKG
AVMSGRGATGPKTMRVSVGEVMSIEGRTRHRRHGRSRAQRIKRGWVWNQFFVLEEYMGSE
PQYVGKLHTDMDHGDSAVKYTLSGEGAGSIFTIDQITGDIHALVGLDREEKSFYTLRAQV
VDTHTGLPLEPESEFIIKVQDINDNEPRFPAGPYSGSVPEMSPTGTYVTQVTATDADDPT
YGNSARIVYSILHGQPYFSVDPKTGVIRTALANMDREVKAEYQVLLQAKDMGGQLGGLAS
TTTINITLSDVNDNPPRFAKSIFHLRVPETAPVGSAVGRIRAHDLDAGSNAEVDYTIVPG
DEGNMFEMISNGQSQEGVVVLKRTLDYETKKSYIFKVEASNAQLDPRFLHLGPFKDSATV
KVTVLDMEEPPVFTKPYYSMDVYEDTPPGTIIGSVTAHDLDASSSAVRYSLEWDTESDSC
FDIDTVEGTISTNEYLDRETAVQHKINVVATKVNNPLLSTKVSVTVNILDVNEFPPELAV
PSESFVCENSRIGQVIQTVSAVDKDLPPVGQRFFFKSPKELRNRNFTVRDFGNNTAGIVT
RRSGFQRRLQDVYVLPVVVEDSGYPAQSSTATLTIRVCSCEMGGSLLTCSAEAIFLPVGL
STGALMAILLCVALLFVMSALYMSQRRNKEKETLMTSKEDIRDNVIHYDDEGGGEADTHA
FDMGTLRNTHSQQAKAHSAVSKTEKNGYGDGVLLHLASRNDDVRSPDIHRQTASVIVAVN
EKTPLSSCGRVTEGDAEKIREFIEHRLEESHKGYAAPPYDSLATYAYEGGGSVAGSLSSI
EESWVIDSSGDFSYLGDWGQPFKTLASILDRQPPTLSKES
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgtccatttccaccctggaagaagccatctttctaaagtttacagtagcatattttttt
ctttcacatcaacactccctgatgatcacaagggaatatgtcactcttgttttggtgggc
tcttgtttcctgttggactacagctcccaaagttctcagctccagagcagaactaagggt
gcggtgatgtcaggcaggggggcaactggacccaaaaccatgagggtgtctgtcggcgaa
gtgatgtcaatagagggtaggacgaggcataggagacatggaaggtcaagggcccaacgt
attaaaagaggatgggtgtggaaccagttcttcgtcctggaggagtatatgggatctgaa
ccacaatatgttggaaagctccacacagacatggaccatggagacagtgcagtgaagtac
actctgtcaggcgaaggagccgggtccatcttcaccatcgatcaaattactggagatatt
catgcgctggtgggacttgacagggaggaaaagtccttctacacgctgagggcccaggtt
gttgacacccacacaggccttcctctggaaccagagtctgagttcatcatcaaggtgcag
gacatcaacgacaatgagccacgattcccagctggaccgtacagcggcagtgtcccggag
atgtccccaacaggaacctatgtgacacaggtgactgccacagatgcagacgaccccaca
tatggcaacagcgcacgcatcgtctacagcatccttcacggacagccctacttctctgtg
gaccctaagacaggagttatcaggacagcactggccaacatggaccgtgaggtgaaagcg
gagtaccaggttcttctccaggccaaagacatgggaggtcagctgggggggctggcgtcc
accaccaccatcaacatcaccctcagcgatgtcaacgacaacccgccccgctttgctaag
agtatattccacctacgggtgccagagactgcgccagttggctcagcagtgggtcggatt
cgggcccatgatttggatgctggcagcaatgcagaggtggattataccattgttccagga
gatgaaggcaacatgtttgaaatgatctctaatggccaaagtcaagagggagtcgtagtc
ttgaaaaggaccctcgactatgaaaccaaaaaatcgtacattttcaaggtcgaggcatcc
aacgcacaactggacccccgttttctccacctagggcccttcaaggactctgcgacggtg
aaggtgaccgtcctggacatggaggagcctcctgtcttcaccaagccgtattactccatg
gatgtgtatgaggacactcctccaggaaccatcattggctcagtaaccgcccacgacctg
gatgccagcagcagcgctgtcaggtactcactggaatgggacacagagtctgacagctgc
tttgacattgacactgttgagggaactatttccacgaatgaatacctggacagagagaca
gcagtacagcacaagatcaatgtggtggcaaccaaagtcaacaacccactgctgtccacc
aaagtgtcggtgacagtcaacatcctggatgtgaacgagttccctcccgagctggctgtt
ccttcagagtcctttgtgtgtgagaactcccgaatcggacaggtgatccagactgtcagt
gctgtggacaaggatcttcctcctgtcggccagaggttcttcttcaagagccccaaagag
ctccgcaaccgaaacttcactgttcgagattttggaaacaacactgccggtattgtgacc
agacgctcaggctttcagcggcggctgcaggacgtctacgttcttcctgtcgtggtcgaa
gacagcggttaccctgctcagagcagcacagccaccctcaccatccgagtgtgctcctgt
gagatggggggctctctgctgacctgttcagccgaggccatcttcctgcctgtgggcctc
agcaccggagccctgatggctattctgctgtgtgtagctctgttgtttgttatgtcagcg
ctgtacatgagccagaggcgcaacaaagagaaagaaactctgatgacatcaaaagaggac
atccgcgacaatgtcattcactacgacgacgagggcggtggcgaggcggacactcatgcc
ttcgacatgggaaccctgcgcaacacacactcacagcaagccaaagcccacagcgccgtc
tccaagacggagaaaaatggctatggggatggggttctgctgcatctcgccagccgcaac
gatgatgtcaggtcacctgacatccatcgtcaaacagccagcgttattgttgccgtgaat
gaaaagaccccgctctcttcctgtggcagagtgactgagggcgatgctgagaagatcagg
gagtttatcgaacaccggttggaggagagccacaagggttatgccgctccgccctatgat
tcattagcaacctacgcctacgagggcggtggctccgtggcgggttcgctcagctccata
gaggagtcgtgggtaattgacagttcaggggattttagttatcttggtgactggggacag
ccgttcaaaacactggctagcatcctggacagacagccgcccactctgtctaaggagagc
tga
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