Hippoglossus hippoglossus (Atlantic halibut): 117778673
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Entry
117778673 CDS
T07778
Symbol
foxc1a
Name
(RefSeq) forkhead box C1-A
KO
K09396
forkhead box protein C
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhip03000
]
117778673 (foxc1a)
Transcription factors [BR:
hhip03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix developmental regulators
117778673 (foxc1a)
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Gene cluster
GFIT
Motif
Pfam:
Forkhead
Motif
Other DBs
NCBI-GeneID:
117778673
NCBI-ProteinID:
XP_034470309
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Position
17:15364108..15366364
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AA seq
472 aa
AA seq
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MQARYSVSSPNSLGVVPYISSDPSYYRAAAGGGYTGMPAPMNMYSHAAHDQYPASMARAY
GPYTPQPQPKDMVKPPYSYIALITMAIQNSPDKKVTLNGIYQFIMERFPFYRDNKQGWQN
SIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDALKEKE
ERQQKDVPPRQQGREQEQAVQGSQPVRIQDIKTENGSATPPQADSPSLSTVPKIESPDSS
SMSSGSPHSIPSSRSIGMDGSEHHQHHGQASTQGFSVDNIMTSLRGSPQGATELTPSLSA
STRTGITPSLSLNYSPSQTSVYSSPCNQNSISTTSNATYHCNMQAMSLYAGDRSSHLAPS
TTVDETLPDYSITTTASSLNHGNLNSGQEGHHPHQGRLTSWYLNQAGDLGHLGATYPAQQ
QNFHSVREMFESQRIGLNNSPVNGNNSCQMSFPPSQSIYRTSGAFVYDCSKF
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctcgctactccgtctccagtcccaactccctgggcgtcgtgccgtacatcagc
agcgacccgagctactaccgggccgctgctggtggaggatacacggggatgccagctcct
atgaacatgtactcccatgcggcacatgaccaataccctgccagcatggcccgtgcgtat
ggaccgtacacacctcaacctcagcccaaggatatggtcaaacccccctatagctacatt
gcgctcatcaccatggctatccaaaactcgcctgacaagaaggtgaccctgaacgggatt
tatcagtttatcatggagaggtttccattttaccgagacaacaagcagggctggcagaat
agcatcagacacaatctgtctctgaatgagtgttttgtcaaggtgccccgtgatgataaa
aaacccggtaaaggcagctactggaccctggacccggactcttacaatatgtttgaaaac
gggagcttcctgaggaggaggcggcggttcaagaagaaggacgcgctgaaggagaaagaa
gagcggcagcagaaggacgtgccgcccaggcagcaaggccgggagcaggagcaggcggtg
cagggctcccagccggtgaggatccaggatattaagaccgagaacggcagcgccacgccg
ccgcaggccgactcgccctcactcagcaccgtgcccaaaatcgagagcccggacagcagc
agcatgtccagcgggagcccccacagcatcccatccagcaggtccataggcatggacggc
tccgagcaccaccagcaccacggccaggcctcgacgcagggcttcagcgtagacaacatc
atgacctccctccgggggtctccgcaaggggccacagagctcacccccagcctcagcgcc
tccactaggacaggtataacaccgtctttgtccttaaactattctccgagccagacctcc
gtctatagttcaccctgtaaccaaaactccatctccactacctccaacgccacctatcat
tgtaacatgcaagccatgagcttgtacgccggggacagatctagccacttggcaccgagc
accaccgtggacgaaacgttgccagattactccatcacgaccaccgcatcctccctgaac
cacggtaatctgaactcggggcaggagggccaccatccccaccaagggaggctgacctcc
tggtacctcaaccaggccggggacctgggccacctgggcgcaacgtacccggcgcagcag
cagaacttccactcggtccgagagatgtttgaatcccaacgaattggcttgaataactcg
ccggtgaatgggaataacagctgtcagatgtcattcccaccgagccaatccatctatcgc
acttcgggagcttttgtgtatgactgcagcaagttctga
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