Hippoglossus hippoglossus (Atlantic halibut): 117778888
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Entry
117778888 CDS
T07778
Symbol
exosc4
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117778888 (exosc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117778888 (exosc4)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
117778888 (exosc4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
117778888 (exosc4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
117778888
NCBI-ProteinID:
XP_034470657
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Position
17:complement(15572821..15574484)
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AA seq
245 aa
AA seq
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MAGMELLSDQGYRLDGRKATELRKVQARMGVFAQADGSAYLEQGNTKALAVVYGPHEMRG
SRSRALHDRAVINCQYSMATFSTAERKRRPHGDRKSTEMSLHLKQTFEAAVMTQLYPRSQ
IDIYVKILQSDGGNYSVCVNAATLAVIDAGIPMRDYVCACSVGFVDETPLADLCYAEESG
GLSSLALALLPRSGQIALLQMDARLHQDHLEALIEAAMTACKGVSKVLDEVVRHHLQEVS
MLTGE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcatggagctgctgtcggaccagggttaccgtctggacgggcgcaaagccacc
gagctgcggaaggtgcaggcccgcatgggggtgttcgctcaggcggacggttccgcgtat
ctggagcaggggaacacgaaggctctggctgtggtgtacggtcctcatgagatgcgtggc
tcacggagtcgggctctccacgaccgggccgttatcaactgccagtacagcatggccaca
ttcagcacggcagagaggaagaggagaccccatggtgaccgcaagtcaacagagatgagc
ctccacctcaaacagacgttcgaggccgctgtgatgacccagctttacccgcggtctcag
atcgacatctatgtcaagattctgcagtcagatggagggaactacagcgtgtgtgtgaat
gccgccactttggctgtgatcgacgcaggcatccccatgcgggactacgtgtgcgcctgc
tcagtcgggttcgtggacgagacgccccttgcagacctttgctacgcagaggaaagtgga
gggctgagctctttggccttggcgctgcttccccggagtggacagatagccctgcttcag
atggacgccagactgcatcaggaccacctcgaggcgctgattgaagcggccatgacggct
tgtaaaggtgtgagcaaggtgctggatgaggtggtgcgacatcatctccaggaagtgtcg
atgctcactggagagtga
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integrated database retrieval system
