Hippoglossus hippoglossus (Atlantic halibut): 117778902
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Entry
117778902 CDS
T07778
Name
(RefSeq) sodium channel protein type 4 subunit alpha-like
KO
K04838
voltage-gated sodium channel type V alpha
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04261
Adrenergic signaling in cardiomyocytes
hhip04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
117778902
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
117778902
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hhip04040
]
117778902
Ion channels [BR:
hhip04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
117778902
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
IQ
GPHH
DUF7109
Presenilin
Motif
Other DBs
NCBI-GeneID:
117778902
NCBI-ProteinID:
XP_034470684
LinkDB
All DBs
Position
17:6602179..6648394
Genome browser
AA seq
1950 aa
AA seq
DB search
MAAMLLPTGPDGLRRFTRESLAAMEQRIAAEQARNTKVCQEAHRNAEPLKPRPDLEAGKQ
LPRIFGDIPPKLIGMPLEDIDPFYYKNQRTFIVLNKGKAIFRFSATSAVYIFTPFHFIRS
IAMKILVHSLFSLFIMFTILTNCCFMAMSDPAPWTKYLEYTFTAIYTFESAIKILARGFC
LLPFTFLRDPWNWLDFSVILMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVRKLADVMILTVFCLSVFALIGLQLFMGLLRQKCVRNLAHCVNSSYSANASFICNN
RTWSSRDDFLSSEDNFYKVEGAKDALICGYGSDAGKCPDGFDCLKVGRNPNYGYTSFDTF
GWAFLALFRLMTQDYWEKLFHQTLRSAGKTYMIFFVLVIFLGSFYLVNLILAVVAMAYEE
QNQATIAEAWQKEREFQLAMEHLRREQRLAGRRQAQETDSVLSPELSPFCLKTGSIRRNS
SRRRRSHRTLSEETEEEAAEEKFEPMDELMPSLSPLPVHSLLATLSSHPLSTRRESQISM
FSTFRARNNSEADFGDDEYSIHGEAFRSRASSTATPWKKRTGSVRSHCSQVFTPSLTVNG
RLNISLDQNGVTTVGLHTPTSIPAYSMERGREDTKPTSAEDQVPRHLLQPSPTVTEPPVH
RKRGLSSVSFFSDAIDELEVSRQKCHPCWLKFAKKYLIWDCCSWWLMMKDWVKFMVMDPF
LDLGITICIVLNTLFMALEHYPMTEEFNTMLSVGNLVFTGIFTAEMVLKLIAMDPYYYFQ
QGWNIFDGVIVCLSLMELGLSNVEGLSVLRSFRLLRVFKLAKSWPTLNTLIKIIGNSVGA
LGNLTLVLAIIVFIFAVVGMQLFGKNYQDFVCKIAIDCQLPRWHMKDFFHSFLIVFRVLC
GEWIETMWDCMEVAGQPLCILVFMLVMVIGNLVVLNLFLALLLSSFSSDNLSAPDEDGDL
NNIQIAIARIHSGVSWLATSVGRLFNRSSKRDKQKDREASQAIKLVGNHVESNGGIFVCY
GDKYIIPEEDSYMTNPNLTVIVPIAPGESDVEFLEEEEISESSEDEDNKPEMVSLSEGST
VDLRKPGEEIDNTSELAEESMEPEECFPELCMRYCKCCEIDTSHGLGEAWWRLRKTCYQI
VEHSWFETFIIFMILLSSGALAFEDIYIEKRKVVKVVLEYADKVFSYIFVLEMFLKWIAY
GFKKYFTNYWCWLDFLIVDVSLISLVANSLGYSDFTAIKSLRTLRALRPLRALSRFEGMR
VVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGKCVNRTGFIHSITLVNNKSE
CLAMNDTQFYWTKVKVNFDNVGLGYLSLLQVATFKGWMEIMHAAVDSRGVEEQPIREINL
YMYLYFVVFIIFGSFFTLNLFIGVIIDNFNQQKRKLGGQDIFMTEEQKKYYSAMKKLGSK
KPQKPIPRPANVLQAFFFDLVAKQAFDIIIMMLIIVNMVTMMVETDEQSERMESILNKIN
LVFIVIFTTECLIKIFALRCYFFTVAWNIFDFVVIILSIVGIVLADIIEKYFVSPTLFRV
IRLARIGRVLRLIRAAKGIRTLLFALMMSMPALFNIGLLLFLVMFIYAIFGMANFAYVKK
QDGVDDMFNFETFGNSMICLFQISTSAGWDNLLSPIMSNSPEECDVNFVNTGTNTRGNCG
SPSLGIAFFVSYIIISFLIVVNMYIAIILENFSVATEESTEPLSEDDFEMFYEVWEKFDS
EATQFIEFSMLSSFADNLSEPLRIAKPNRIKLISMDLPMVSGDRIHCLDILFAFTKRVLG
ESGEMDALKQQMEEKFMVTNPSKVSHEPITSTLRRKLEEVSVIIIQRCYRRHLVRRHMKQ
ASYLYRQINYETVVDVENAPETEGLIASMIQHYGLVGVEIEQTTEDTLLSSPPSYDSVTK
AASDLSEVVRIISRDSELGEPGEKYEETFL
NT seq
5853 nt
NT seq
+upstream
nt +downstream
nt
atggcagccatgctgttaccaacgggtcctgatggcttgcggcggttcactcgcgaatcc
ttggctgccatggagcagcggattgcagcggagcaggccaggaacaccaaggtttgccag
gaggctcacaggaacgcagagccactcaaacccaggcccgacctggaggcaggcaagcag
ctgccgcgcatcttcggtgacatccctccaaaacttatcgggatgccactggaagacatt
gatccgttttactacaagaaccagaggacttttatagtacttaacaaagggaaggccatc
ttcagattcagtgccacgtctgcagtttacatatttactccatttcacttcatcagatcg
attgccatgaaaattttggtccattcattgtttagcctgttcataatgttcactatactg
accaactgttgcttcatggccatgtccgacccggcaccatggaccaagtacctggagtat
acgttcactgccatttacacctttgagtcagcgataaagatattggcgagaggattctgc
ttgttgccgtttaccttcttgagagacccatggaactggctggacttcagtgtcattctc
atggcatatgtgacagaatttgtagaccttggaaacgtctctgcattgagaaccttcaga
gttctacgagctttgaaaaccatctcagttatcccaggtctcaagaccatcgttggtgcc
ctgatccaatccgtgaggaagctggcagatgtgatgatcctaaccgtcttctgtctcagc
gtgttcgccctcattggcctgcagctcttcatggggctcttgcgacaaaagtgcgtccgt
aatcttgcacactgcgtcaactcctcctacagcgccaacgcctccttcatctgtaacaac
agaacctggagctccagggatgacttcctcagcagtgaagataatttctacaaagttgaa
ggagcaaaggatgccttaatatgcggatatggaagtgatgcagggaagtgtcctgatgga
tttgactgcctaaaagtaggaagaaatccaaactatggctacaccagtttcgatactttc
ggctgggcttttctggccctgttccgactaatgacacaagactactgggaaaaactcttc
catcagaccctgcgctctgcagggaagacctatatgattttctttgtgctggtaatcttc
ctggggtccttctacctggtcaacctgatcctggccgtggtggcgatggcctacgaggag
cagaatcaggcaaccatcgctgaggcctggcagaaagagagagagtttcagctggcaatg
gagcaccttcgacgagagcaaagattggcgggaaggagacaagcccaggagacagactca
gtgttgtccccagagctgtctccattctgtctgaagacaggaagtatacgacgaaacagc
agcagaagaagaagatctcacaggaccttgtcagaggaaacagaggaggaagctgcagag
gagaagtttgaaccaatggacgagctaatgccatctctgtctcccctgcctgtccactct
ctgctggccacgctctcatctcaccccctcagcacgaggagagaaagccagatcagcatg
ttcagcaccttccgggcacgcaacaactcggaggcagactttggggacgacgagtatagc
attcatggggaggccttcaggagtcgggccagttccacagcaacaccctggaagaagaga
actggcagtgtgaggagtcactgctcacaagtcttcaccccgagcctcaccgtcaatggt
cgtctcaacatttccctggaccaaaatggggtcaccactgtcggcttgcacactcccacc
tccatccctgcgtacagcatggagaggggcagagaagacacaaaacccaccagtgcagag
gaccaagttcccagacatctcctccagccttctccgacagtgaccgagcctccagtgcac
aggaaaagaggcctgagctctgtcagtttcttcagtgatgccattgatgagctggaggtg
tcgaggcaaaagtgccatccctgctggttaaagtttgccaagaagtacctgatatgggac
tgctgctcctggtggctgatgatgaaggactgggtgaagtttatggtgatggatcctttc
ctggatctaggcatcaccatttgcatcgtgctgaacaccctcttcatggccctggagcac
taccccatgactgaagagttcaacaccatgctctcagtgggcaatctggtgtttacaggg
atctttacagcagagatggtgctgaagctgatcgccatggacccttactactacttccaa
cagggctggaacatctttgatggcgtcatcgtttgcctcagtctgatggagctgggtctt
tccaatgtggaggggctgtctgtcctcagatcctttagactgttacgagtctttaaactg
gcgaagtcctggcccactctcaacactctcatcaagatcatcggcaactctgtgggcgcc
ctgggaaacttgacgttggtgttggccatcatcgtcttcatcttcgccgtggttggcatg
cagctgtttggcaaaaactatcaggattttgtgtgcaagatcgccatcgactgtcagctg
cctcgctggcacatgaaggacttcttccactcgttcctgatcgtgttccgggttctttgt
ggcgagtggatcgaaaccatgtgggattgtatggaagtggcggggcagcccctgtgcatc
ctggtcttcatgttggtcatggtcattgggaacttggtggtgctgaatctctttctggcc
ttgctgctcagctccttcagctccgacaacctctctgctccggatgaagatggcgatttg
aataacatccagatcgctatcgcccgtatccattccggtgtctcctggctggccacaagt
gttggcagactctttaaccgcagctcgaagcgtgacaagcagaaggatagggaagccagt
caggccatcaagctggttggcaatcacgtggagagcaatggtggaatttttgtatgctat
ggagataaatatatcatcccagaggaggacagctacatgaccaacccaaacctgaccgtc
attgttcccatcgcacccggagagtcagatgtggagtttctcgaagaggaggagatttct
gagtcgtcagaggatgaagacaacaagccggagatggtcagcctgtcagagggcagcaca
gtggacctgaggaagcctggagaagagatagacaacacatcagagctggctgaggagagc
atggagccagaggagtgcttccctgaattgtgcatgaggtactgtaagtgctgtgagatc
gacaccagccacggtcttggcgaggcctggtggaggctgagaaagacctgctaccagatc
gtggaacatagctggtttgagaccttcatcatcttcatgatcctgctcagcagcggagct
ttggcattcgaggacatctacatcgagaagagaaaagtcgtgaaggtggtgctggagtac
gctgacaaggtcttctcctacatctttgtgctggagatgttcctcaaatggatcgcgtac
ggtttcaagaaatatttcaccaactactggtgctggctcgactttctaatcgtggacgtg
tccttgataagcctggtggcaaactcactgggatattccgacttcactgccatcaagtcc
ctgaggaccctccgggctctgagacctctcagagctctgtccagattcgagggcatgagg
gtggtcgtgaacgctcttattggagccattccctccatcatgaacgtgctgctcgtgtgt
ctcatcttctggctcatcttcagcatcatgggagtcaacctgttcgccggcaagttcggc
aagtgcgtgaacagaacgggcttcatccacagtatcaccttggtcaacaacaagtccgag
tgcctcgccatgaacgacacccagttctactggactaaagtgaaggttaacttcgacaat
gtgggactcgggtacctgtccctgctgcaagtggccacgtttaaaggatggatggagata
atgcatgcagctgttgactcaagaggagtggaggagcagcccatcagagaaatcaacctc
tacatgtacctatactttgtcgtcttcatcatattcggctccttcttcaccctcaatctc
ttcattggtgtcattattgacaatttcaatcagcagaagagaaagttaggtggacaggat
atcttcatgaccgaagaacagaaaaagtactatagtgccatgaagaagttgggatcgaaa
aagccacaaaagccaataccaagacctgcgaacgttctccaagccttcttcttcgatctc
gttgccaagcaagcctttgacatcattatcatgatgctcattatcgtcaacatggtgacc
atgatggtggaaacagatgagcagtccgagcgcatggagtccatcctcaacaagatcaac
ctggtcttcattgtgatcttcaccaccgaatgcctgatcaagatctttgccctccgttgt
tatttcttcacagttgcatggaacatctttgactttgtggtgatcattctctctattgtg
gggattgttcttgcagacatcattgagaagtactttgtatctccgaccctgtttcgagtc
atcagactggcaaggataggacgcgtacttcgacttatacgtgcagccaaaggaatacga
actttactgtttgccttaatgatgtccatgccagcactgttcaacatcggcctcctgctt
ttcctcgtcatgttcatctatgctatcttcggaatggcaaacttcgcctacgtgaaaaaa
caagatggggtcgacgacatgtttaattttgagacttttggaaatagcatgatctgcctt
tttcagatcagcacctccgcaggctgggacaacctcctgagtccgatcatgtccaactcg
ccagaagagtgtgacgttaattttgtcaacaccggcaccaacacccggggaaactgtggc
agcccgtcattgggcattgctttctttgtcagttacattatcatctctttcctaattgtg
gtaaatatgtacatagctattattctggagaacttcagtgttgccacggaggaaagcaca
gagcccctgagcgaggacgactttgagatgttttatgaggtttgggaaaagtttgattct
gaggcgacacagttcattgagttttcgatgctgtcaagcttcgctgacaatttgtctgag
ccgctgcgcatcgccaagcccaacaggatcaagttgatctccatggaccttcccatggtc
agcggggacaggatccactgcctggacatcctgtttgccttcacgaagcgtgtcctcggt
gagtcaggcgagatggacgcgctcaagcagcaaatggaggagaagttcatggtgacaaac
ccctccaaggtttcccacgagcccatcacctccacgctgcgccgcaagctggaggaggtg
tctgtgatcatcatccagaggtgttacaggaggcacctggtccgtcggcacatgaaacag
gcgtcctacctctacagacaaataaactacgagactgtggtggatgtggagaacgctcca
gagacagaggggctgatagcctccatgatacagcactatgggcttgtgggggtggagatt
gaacagacaacagaggacactctcttgtcctcaccaccatcgtatgacagcgttaccaag
gcagccagcgacctctcggaggtcgtcagaataatatccagagactctgaacttggagag
cctggtgaaaagtatgaagaaacttttctttga
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