Hippoglossus hippoglossus (Atlantic halibut): 117779160
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Entry
117779160 CDS
T07778
Symbol
sorcs2
Name
(RefSeq) VPS10 domain-containing receptor SorCS2 isoform X1
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117779160 (sorcs2)
Membrane trafficking [BR:
hhip04131
]
Protein recycling
Others
Others
117779160 (sorcs2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
InlK_D3
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
117779160
NCBI-ProteinID:
XP_034470974
LinkDB
All DBs
Position
18:complement(2979597..3271410)
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AA seq
1244 aa
AA seq
DB search
MWDSALEDDAAVADQQVAPQSRPEDRAWHRDASTLFPLSALAPVPSLLPSLSPPLSLSRL
TVYSYLSTTSISSLSISLRDTSASPAQSMAPLRPKEPLSAAAHLCVFLLTTSAWMALPGP
ALCDSGALNRRGGLDRTFDTGVGDGGSPPGFQRDGDEGSSPRFRRALSREKQMALLSSSF
VLKGDATHNQAMVHWTGENSSVILILTKYYHADSTKVLESSLWRSSDYGTTYTKLNLMPG
TTIVVTSFYICPTNKKKVVLVGSSINERDQMLFISTDEGSSFQRQSIAFTPDTIIFHPKE
EDKLLAYCKEGRIFASTDLGRKWTLLQERVTKDRVFWSVSGVDVDPDLVHMEMQDTSGGY
LYVTCLIQNCSDKMVTAQFLGKIDHNSLLVQDDYIFVKVTTGNRTKHYVSYRRNEFVQMR
FPKYALPKDVQIVSTDENQVFLALQEWYQSDTYNLYQSDPQGVYYSIVLENVRSTKQPEE
NVLIDILEVRGIKGVFLANQKSNGKVTTLITYNKGRSWEPLAPPTTDMNGKPVSCKAPEC
QLHLHLRWADNPYVSGTVHTKDSAPGLIMGAGNLGSKLVEYKEEMYVTSDCGKTWRQVFE
EEHHILYMDHGGVIVAIKDTSIPLKILKFSIDEGQTWTVHNFTSTSVFVDGLLSEPGDET
LVMTVFGHISYRSDWELVKVDFRQSFPRQCTESDYDSWQLTDLQGEKCIMGQERSFRKRK
DTAFCIKGKSYTSALITKPCQCTEKDFNCDYGFERSHKEGDRCLSDFWHDPDSPPEDCHL
GQTYESTTGYRKVISNVCEGGLNRQQSAKQHNCPLLPPRGLRIGIKGQMLAVAPGDDITF
IVHQEQGDTSSTKYQVDLGDGVRAIYQNLTVTDEPIQHRYEKPGVYKVTVKAENMAGHNE
ATMYIQVTAPLQEVHLEVVPIAGRNHEVNLTAIVLPTEANLTVFYWWIGDNLRPTLTLQN
SLLTRFPETGEVSVTVQASNGRSMVQDTRTVRVYDNFQVIPLSFSRNLDHFNPNIPEWRE
DIGQVVTKILAKITGVPQESLVTVVKPGLPTTADLYVLPLSSKPAKKSMFVDKRIPAIMQ
AFNDNNVSFVVRGGLQVLVMLADPNAGLIANDSTATAAETGYHGAAGGPGVWALAVIFLI
SIIATGSFILYKFKSPWIRTEDAYPPLFFRKLPGNRNVYAQMHNEKEQEMTSPVNHSEDT
QHIIQGEEFIDDDLDSQTLGNAGGNHSGVVLSINSRELHSYLTS
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgtgggacagcgcacttgaggatgacgctgcggtagctgaccagcaggtggcgccgcag
agccgccccgaggaccgcgcttggcacagagacgcgtccacgttgttcccgctgtctgcc
ctcgctccagttccctccctccttccctcactatctccccctctctctctctctcggctt
acagtgtactcctatctttctaccacaagcatcagcagtctctccatcagtctccgcgat
acgagcgcttctccggcgcaaagcatggcacctctgcgccccaaagagccgctctctgcc
gctgcgcacctctgcgtctttctgttgaccacctcggcctggatggcactgccgggaccc
gcgctctgtgacagcggggctttaaaccgacgcggcgggctggaccgtacgtttgacacg
ggcgtcggagacggaggctccccgccgggcttccagagggacggtgacgaggggagctcg
ccccgcttcaggagagcactatcccgggaaaaacaaatggcactgctcagcagctccttc
gtgctcaaaggggatgcgacccacaaccaggcgatggtccactggacaggagagaacagc
agcgtcatcctgatcctgaccaagtattaccacgctgactccaccaaggtcctggagagc
tcgctgtggaggtcttctgactatggcaccacctacaccaaactcaacctgatgccaggg
acgaccattgtggtgaccagtttctacatctgcccgaccaacaagaaaaaggtagtgctg
gtgggctcatccatcaacgaacgggatcagatgctgttcatcagcaccgacgaaggttcc
tctttccagcgacagtccatcgctttcacccccgacacgatcatcttccaccccaaggaa
gaggacaagctcctcgcctactgcaaggagggcaggatctttgcttcgaccgacctgggc
cgcaagtggactttgcttcaggagcgtgtgaccaaggacagagtcttctggtctgtatct
ggtgtggatgtggaccctgatctggtgcacatggaaatgcaagatacaagtggaggttac
ctgtacgtcacgtgtctcatccagaactgctcagacaagatggtgacggctcagttcctc
ggcaaaatcgaccacaattcgctgttggtgcaggacgactacatatttgtcaaggtgacc
acagggaatcgtaccaagcactatgtgtcctatcggcgcaacgagtttgtccagatgagg
tttcccaagtacgccttgccaaaggatgttcagatagtgagtacggacgagaaccaggtc
ttcctcgccctccaggagtggtaccagtcagacacctataacctgtaccagtcggacccc
cagggtgtctactactccatcgtgctggaaaatgttcgcagcaccaagcagccggaggag
aacgtcctcatcgacatcctggaggtgcgtggaatcaaaggggtctttctggccaatcag
aagagcaatggcaaagtgacgactctcatcacctataacaaaggacgaagctgggagccc
ctggccccgcctaccactgacatgaatggaaagccggttagctgcaaagcacccgagtgt
caactccacctgcacctgcgctgggccgacaacccctacgtgtctgggactgtccacacc
aaagactctgctccaggtctcatcatgggagccggtaaccttggctccaagttagtcgag
tacaaggaagagatgtacgtcacttcagactgtgggaagacatggagacaggtgtttgag
gaggagcatcacattctgtacatggaccacggtggagtcattgttgccatcaaggacact
tctatccccctcaagatactcaagttcagtatcgatgaaggacagacgtggaccgttcac
aacttcaccagcacctctgtgttcgttgacggactcctgagcgagccaggagacgagacc
ctggttatgaccgtgtttggccacatcagctacaggtcggactgggagctggtcaaagtg
gacttcaggcagtcttttccccgtcagtgtacagagtctgactatgactcctggcagctc
acagacctgcagggagagaagtgcattatgggccaggagcggagtttcaggaagagaaag
gacaccgcgttctgcatcaaaggaaagagctacacctctgctctcatcaccaaaccctgt
caatgcacagagaaagacttcaactgtgactacggttttgagaggtcccacaaagagggc
gatcgctgcttatctgacttctggcatgacccagactcaccccctgaagactgccatcta
ggacagacctacgagtccaccactggctacaggaaggtgatatctaatgtgtgtgagggg
gggctaaaccggcagcagagcgccaaacagcacaactgccctctactgccccctagagga
ctacggatcggcatcaaagggcagatgctggccgtggcacctggtgatgacatcacattc
attgtccatcaggaacagggcgacactagcagcaccaagtaccaggtggacctcggtgac
ggcgttcgggccatttaccagaacctgacggtgactgatgaacccattcagcatcgctac
gaaaagcccggcgtctacaaggtcacagtgaaggccgagaatatggcggggcacaacgag
gccaccatgtacatccaggtcacagctcctctacaagaagtgcacctggaagtggttccc
atcgctgggagaaaccatgaggtcaatcttaccgccatagttcttcccactgaggccaac
ctgactgtcttctactggtggataggagacaacctgcggccgacgctgactctgcagaac
agccttctgactcgtttccctgagacaggagaggtttcagtcaccgtccaggcttccaac
ggccgatccatggtgcaggataccaggaccgtccgagtctacgataacttccaggtcatc
cctctgagcttcagcaggaatctggaccacttcaacccaaacatcccagagtggagagag
gacattggccaggtggtcaccaaaattctcgccaagatcacaggtgtccctcaggagtcc
ctggttactgtggtgaagcccggcctccccaccaccgctgacctgtacgttctcccactg
agcagcaaaccagccaagaagagcatgtttgtagataagcgtattccggccatcatgcag
gccttcaacgacaacaatgtcagctttgtggtgagaggaggtctacaagtgctggtgatg
ctagctgacccgaatgcaggtctaattgctaatgactcaacagctacagcagcagagact
ggttaccacggagcagctggaggtccaggtgtttgggctctcgcagtcattttcctcatt
agcatcatcgccactggctctttcatcttgtacaagttcaaaagtccttggattaggact
gaggatgcctatcctccgctgtttttcaggaagcttccaggaaatcgcaatgtctacgcc
cagatgcacaatgagaaggagcaggagatgacaagccctgtcaatcacagcgaggacacc
cagcacatcattcagggcgaggagttcattgatgacgacctggactctcagactctaggt
aacgcaggaggtaaccattcgggtgtggtcctgagcatcaactccagagagctacacagt
taccttaccagctga
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