Hippoglossus hippoglossus (Atlantic halibut): 117779292
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Entry
117779292 CDS
T07778
Symbol
dis3l
Name
(RefSeq) DIS3-like exonuclease 1 isoform X1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117779292 (dis3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117779292 (dis3l)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
117779292 (dis3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
Rrp44_CSD1
CSD2
Rrp44_S1
OB_HELZ2
Motif
Other DBs
NCBI-GeneID:
117779292
NCBI-ProteinID:
XP_034471257
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All DBs
Position
3:855386..870120
Genome browser
AA seq
1049 aa
AA seq
DB search
MIKTEKVLHLKSSRGRKVRVVREHYLRERVPCCSCACQAACDNEGKLLPADLTHYVVPDV
GVVVDYLEILEFRELQGIIFTQTSCQAVQHSKGRRQYNRLRNLLKDPRHDCVLFANEFQE
YSYCPREKGESQDKWQSRCVYSAAVWYFNHLAGLMDIVMITDDQEAVTRYSSLNPGVYVI
SVQEYLQNFWPELRAAHELCVSVCQALQEKESGGREGEFAEHLPPEVLEAGIKSGRYIQG
TLNVSKHRAQTEAFIRTEDFSNKSTGSWCVLVPGDKNRNRAMHCDVVVVELLPKNEWRGK
ISTLTEAQGEEKSGESGDSQPLPTGRVVGILQRNWRDYVVTFPPRDGTQPQSRNSQRILA
VPWDHRIPKIRISTQQADALQDHRVMVRIDSWESTSLYPNGHSVRVLGRAGELETEVQTI
LIENCIHVPPFSDAQLKEMPVSSPEKPWQVDPVQVAERRDLRDSHLVFSVDPKGCEDVDD
TLSVRSFADGKLLELGVHIADVTHFVSEGSLTDLEARTRATTYYLADRRYDMLPAVLSAD
LCSLLGGVDRYAMSVLWELDAHTLAVNQVWFGRTIIRSSYQLHYELAQALLNGEQAEVAE
LGQLGSEEKDVKLSELTQALETLTHVARHLRAQRDRGGALELEGVEVRAQLDEDGNITAL
VPRQPLEVHETVAECMIYANHWVARKIQESFPHQALLRYHPPPRQEFFSQLVESAKAGGY
TIDTRTNKALADSLDRAVDPQDPLVNRLLRMMTTQAMSEALYFSTGAQSVDQFYHYGLAL
DRYTHFTSPIRRYADVVVHRLLSAALTAERGGGPGRALSSNKQLEEMAQHINNKNRAAKR
AQKISTELFQCLYFKERDPQTDQRCVADAVIYSIRDNGVLVFVSEYGVKGPVYMKNREGQ
VVAAGPDGSCEWQSGSVRRFSDHITTTSSCGTSTFRLFDHVTVRISVHSSHCHADRLNLE
VVSNQPYRSAATQQPSSQGRSQLVQEVVRLAEEAYQQAQEKAARRPKLSREEREFSQSKT
PNLYSLLEEVRELALMDPDMIPQVCASTA
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaaccgagaaggttctgcacctgaagagcagccgaggccggaaagtccgagtg
gtccgtgaacactacctgagggagcgcgtgccctgctgcagctgcgcgtgtcaggcggcc
tgtgacaacgaggggaagctgctccctgcagacctcactcactatgtggtgccggacgtc
ggggtggtggtcgactacctggagatcctggagttcagagaactgcagggaatcatcttc
acacagacctcgtgtcaggctgtgcagcacagcaaaggacgcaggcagtacaaccgtctg
cggaacctgctgaaagacccccgacacgactgcgtgctgtttgccaacgagtttcaggag
tactcgtactgtcccagggagaagggcgagagccaggacaagtggcagagccggtgtgtg
tactctgcagcagtgtggtactttaaccacctggcaggattgatggatatcgtgatgatc
acagacgaccaggaagctgtgactcggtacagcagcctcaaccctggagtgtacgtcatc
tccgtccaggagtatttgcagaacttctggcccgagttgcgagcggctcacgagctgtgc
gtctccgtctgtcaggcgctgcaggagaaggagagtggggggagggagggagagttcgcc
gagcatctcccgcctgaagtcctggaggcgggcatcaagtccggacgctacattcagggg
actctgaacgtcagcaaacaccgagcacagacggaagcttttatcaggacggaggacttt
tccaacaagagcacaggcagttggtgcgtgttggtgcccggcgataagaatcgaaaccga
gcgatgcactgcgacgtggttgtggtggagctgctgccgaagaacgagtggagagggaag
atctcgaccctgacggaggctcagggggaggagaagagcggagagagcggcgacagtcaa
ccactgccgacaggccgtgtagtcgggatcctgcagaggaactggagggactacgtggtc
acgttccccccccgcgacgggactcagccccagagcaggaattcccagagaatcttggct
gtgccctgggaccatcgcatccccaagatccgcatcagcacgcagcaggccgacgctctg
caggaccacagagtgatggtgcgcattgactcgtgggaaagcacgtcgctctacccgaac
ggccacagcgtgcgggttctgggtcgagctggagagctggagaccgaggtccagaccatc
ctcatcgagaactgcatccacgtgcctccgttctcagatgcacagctgaaggagatgccg
gtcagctcccctgagaagccgtggcaggtggatcccgtccaggtggcggagcggcgggac
ctcagggacagtcacctggtgttcagcgtcgacccaaagggctgcgaggacgtagacgac
acgttgtcggtgcgaagcttcgccgacgggaagctgctggagctcggtgtccacatcgct
gatgtcacccactttgtcagcgagggatcactcaccgacctggaagcacgaaccagggct
acgacgtactacctggcggaccgcaggtacgacatgctgcctgcggtgctcagtgcagac
ctctgctctctgctgggaggagtcgacaggtatgcgatgagcgtgctgtgggagctcgac
gcacacaccctcgccgtcaaccaggtgtggttcggtcgcacaataatccgctcgtcctac
cagctgcactacgagctggcccaggcgctcctcaacggagagcaggcggaggtggcggag
ctggggcagctgggctctgaggagaaggatgtgaagctgtccgaactcacccaggctctg
gagacgctcacacatgtagccagacacctccgagcgcagagggaccgaggaggagcgctg
gagctggagggggtggaggttcgcgcccaactggatgaggacgggaacatcacggccctg
gtcccccgtcagccgctggaggtccacgagaccgtggccgagtgcatgatttacgccaac
cactgggtggcgcgcaagatccaggagtccttccctcatcaggcgctgctgaggtatcac
ccgccgccacggcaggagttcttcagtcagctggtggagagcgccaaggctggaggatac
accatcgacaccaggaccaacaaggctttagctgactccctggaccgagcggtggatccc
caggacccgctggtgaacaggctgctgaggatgatgaccacccaggccatgtccgaggct
ctgtacttctccactggtgctcagtccgtggatcagttctaccattacggtctggctctg
gaccgctacacccacttcacctcccccattcgacgctacgccgatgtcgtggtccaccgc
cttctctccgcagccctcaccgcggagaggggagggggccccggcagagctttatccagt
aacaagcaactggaagaaatggctcagcatatcaacaacaagaatagggcagccaagcga
gcgcagaagatctccacagagctgtttcagtgtctctacttcaaagagagagatcctcag
actgatcagcgctgcgtggccgacgccgtcatctactccatccgagacaacggcgtgttg
gtgtttgtctcagagtacggcgtgaaggggccggtgtatatgaagaatcgggagggccag
gtagtggcggcaggaccggacggcagctgcgagtggcagagcggctcagtgcgacgcttc
tcagaccacatcaccaccacctccagctgcggcacatccaccttcaggctgtttgaccac
gtcactgttcgtatttctgtccactcctcccattgccacgccgaccggctaaacctggag
gtggtcagcaaccagccgtaccgcagcgccgccacccagcagcccagctcccagggccgc
agccagctggtgcaggaggtggtgcgtctggccgaggaggcgtatcagcaggcccaggag
aaggcggcccggcggcccaaactctccagagaggagagagagttcagtcagagcaaaact
cccaatctgtactcgctgctggaggaggttcgagaactggcactaatggacccggacatg
atccctcaggtctgtgcatcaacggcttag
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