Hippoglossus hippoglossus (Atlantic halibut): 117779295
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Entry
117779295 CDS
T07778
Symbol
ajuba
Name
(RefSeq) LIM domain-containing protein ajuba
KO
K16682
LIM domain-containing protein
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117779295 (ajuba)
03036 Chromosome and associated proteins [BR:
hhip03036
]
117779295 (ajuba)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
117779295 (ajuba)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
117779295 (ajuba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
117779295
NCBI-ProteinID:
XP_034471259
LinkDB
All DBs
Position
18:12238947..12247348
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AA seq
731 aa
AA seq
DB search
MDRPISKLLEKLKLTDSGSVKFNSSKKKHDSANNSNNSNANAGISRGGGGGGGGGGGGSG
LPPAPGSAAASPSRPGQFPLASATTSDACVPASGRGGGGGIPPPQLLTSPQTSATVGTIS
SDGEQPLHPSTLAPLRRRSPQQRASCYLGEGVDSHMRRESGLGPECDIMGTFGSRTSLNQ
RRYSLELQQLVKRQQLLSQPPPLSGPPPYPAAAGYGSAPRGGLAEPGYLSEPERHKRLSL
QEALFYKRLSTGSELWESPRPASLSHPPHRPSDVTGGGVGGSFFYPPGPTVSPCSSFSLQ
ESVLVSPRSSFASSTASGGGGGSPMGSRCSSNRTSGISLGYDSRYSASGGLPPQQPSPSM
QSGMCVAGYCAPGRPGLTPVEAWTQYLDGGMRPGAHDSRHSYPPAVGSPAAACYRGGPEW
WDEQQVGARGKEGGVMGERARYSDLPGTRYQEELTRLLLRDAALEGDGLLEGLMLKEQSL
ALTALSKPSVTTLGPSSAGGPGKPQEDPGVGAGREATENRQEYFGTCVKCGKGVYGADNA
CQALDNLYHTRCFTCVSCGRTLRNKDFYNVSGSVYCKEDYMFSGFQAAAEKCSVCGHLIL
EQILQALGNSYHPGCFRCVVCSKALDGVPFTVDQHSNIYCVADYNKTFAPKCAACLQPIL
PTEASEEILRVVSMNKDYHFECYQCEGCGKRLSDKPGSQCFPLDTHLLCHSCHMGRVCTS
ATHNIPPHNTH
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggaccggcccatcagcaagttactggagaagttaaagctcacagactcgggcagtgtg
aaattcaacagttccaagaaaaaacacgactctgccaacaactccaataacagcaacgcc
aacgctggcatctccagaggaggaggaggtggcgggggtggtgggggtgggggcagcggt
ctgccaccagctcccggctctgcagctgcctcgccctccagacctggccagttcccgctt
gcctctgcaaccacaagtgatgcatgtgttccagcgagtgggaggggaggagggggaggc
attcctccccctcagctcctcacctcaccacagacttccgccacggtgggcaccatatct
tcagatggggagcagccgcttcacccctccaccttggcaccgctgaggcggcgctccccc
cagcagcgagcttcctgttacctgggggaaggtgtggattcccacatgaggcgggagtct
ggcctggggcccgagtgtgacattatggggacgtttggatccaggacgtccctgaatcag
cggcgctactccctggagctccagcagctggtcaaacgacagcagctcctgtcccagcca
cctcctctctctgggcctccgccgtaccctgccgccgcgggctatgggtcggcccccaga
ggtggtctggccgagcccgggtacctctctgagcctgagaggcacaagcgtctctctctt
caggaggctctgttctacaaacgcctgagcacgggtagtgaactgtgggagagccccagg
cccgcgtccctctctcatccaccacatcggccttctgatgtgactggaggaggtgtagga
ggaagcttcttctaccctccagggccgactgtgagcccatgctcgtctttcagcctccag
gagtcggtgctggtcagccccaggtccagcttcgcctcgagcacggccagcggcggcggg
ggtgggagccccatggggagccgctgtagcagcaaccggaccagcggcatcagcctgggc
tatgactcccggtactctgcctctggaggactccctccacagcagccgtccccctctatg
cagtcggggatgtgtgtggctggttactgcgccccaggaaggcctgggctcacccctgta
gaggcctggactcaatacctggatggagggatgcgtccaggggcccacgacagtcgacac
tcgtacccacctgctgtaggaagcccagcagctgcatgttaccggggtggcccagagtgg
tgggatgagcagcaggtgggggcgagaggcaaagaggggggtgtgatgggagagagggcc
cgctactcggacctgcccggcacccgctaccaggaagagctcacccgactgctactgaga
gatgcggcgctggagggcgatgggctcctggagggcctgatgctgaaagagcagtccctc
gccctgacggctctctccaaacccagcgtaacaacactggggccttcgtcagctgggggg
cccggcaaacctcaggaggacccgggagtcggagcgggacgggaggccacggagaaccgc
caggagtactttggaacctgtgtgaagtgtgggaaaggcgtgtacggggcggacaacgcc
tgccaggctctggacaacctctatcacacacgctgcttcacctgtgtgtcctgtggacgc
accctgaggaacaaggacttctacaatgtcagtggctctgtgtactgtaaagaggattac
atgttttcgggattccaggctgctgcagagaagtgtagtgtgtgtggccatcttattctc
gaacagatccttcaggctctcgggaactcgtaccatcccggctgtttccgctgtgtggtt
tgctccaaggctctggacggcgtgcctttcaccgtggaccagcacagcaacatctactgc
gtcgcagactacaacaagacttttgcccccaagtgtgctgcctgtttacaacccatctta
cccactgaggccagtgaagagatcctcagggtcgtgtctatgaacaaggactatcacttc
gagtgttatcagtgcgaggggtgtggaaagcggctctcggataagcccggctcgcagtgc
ttccccctggacactcatctcctctgccactcctgtcacatgggcagagtgtgcaccagc
gccacacacaacattccccctcacaacacacactga
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