Hippoglossus hippoglossus (Atlantic halibut): 117779399
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Entry
117779399 CDS
T07778
Symbol
cldn15a
Name
(RefSeq) LOW QUALITY PROTEIN: claudin-15a
KO
K06087
claudin
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03272
Virion - Hepatitis viruses
hhip04382
Cornified envelope formation
hhip04514
Cell adhesion molecule (CAM) interaction
hhip04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
117779399 (cldn15a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117779399 (cldn15a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117779399 (cldn15a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117779399 (cldn15a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hhip03037
]
117779399 (cldn15a)
04147 Exosome [BR:
hhip04147
]
117779399 (cldn15a)
Cilium and associated proteins [BR:
hhip03037
]
Other cilia and associated proteins
Stereociliary proteins
117779399 (cldn15a)
Exosome [BR:
hhip04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
117779399 (cldn15a)
Exosomal proteins of colorectal cancer cells
117779399 (cldn15a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
KRE1
Motif
Other DBs
NCBI-GeneID:
117779399
NCBI-ProteinID:
XP_034471462
LinkDB
All DBs
Position
18:complement(12094914..12098107)
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AA seq
222 aa
AA seq
DB search
MDPIVEVVALVLGFIGWVMVGIALPNRYWRTSTVDGNVITTSTIYENLWMSCATDSTGVH
NCREFPSLLALSGYIQASRALMITAIAFGAIGLFAALVGVQCSKAGGENYVLKGRIAGTA
GVMFILQGLCTMVAVSWYAFNITQEFFDPFYPGTRYEIGXGLYIGWCSAVLAIAGGVCLT
CSCKLGKEEPYPLPYQNRGTVYSGTAPTRSVAASTYGRNAYV
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggatccgatcgtggaagtggtggctctggtcctggggttcattgggtgggtgatggtg
gggatcgccctgcccaaccgttactggaggacctccaccgtggacgggaacgtcatcacc
acgtccaccatctatgaaaacctgtggatgtcatgtgcgacggactcgaccggggtgcac
aactgcagggagttcccttcactgctcgctctaagtggttacatccaggcgtctcgagcc
ttgatgatcacggccatagcgtttggcgccattggactgtttgcggccctggttggagta
cagtgctcgaaggcaggcggggagaactatgtcctgaaggggaggatcgccggcactgca
ggggtcatgttcatactccaaggtttgtgcacgatggtcgcagtgtcctggtacgccttc
aatatcactcaggaattcttcgacccgttctaccctgggacgaggtatgaaatagganag
gggctttacatcggctggtgctcggctgtgctcgccatcgcaggaggggtctgtctcacc
tgctcctgcaaactgggcaaggaggagccataccctttgccttatcagaacagaggaacc
gtatattctggaactgctccgaccagaagcgtggctgccagtacttacggccgaaatgct
tacgtttga
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