Hippoglossus hippoglossus (Atlantic halibut): 117779409
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Entry
117779409 CDS
T07778
Symbol
dtx4a
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4a
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117779409 (dtx4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117779409 (dtx4a)
Enzymes [BR:
hhip01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117779409 (dtx4a)
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117779409 (dtx4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf_RING_Vps8_fungal
zf-RING_2
PHD_NSD
zf_RING_Vps8
zf-ANAPC11
zf-RING_Vps41
zf-UDP
PHD
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
117779409
NCBI-ProteinID:
XP_034471470
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All DBs
Position
18:10172536..10183429
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AA seq
768 aa
AA seq
DB search
MLLASAVVVWEWLNEHGRWRPYSPAVCHHIEAVIRSDPRCGSVVLGQVDSRLSPYIIDLH
SMHQFRQDTGTLRPVRRSFYDPTSAPGQGWLWEWENDTGSWTAYDTDVGIAIQAARDRQQ
PWLDLAPLGFCYLIDFESMTQINGQTQRCRRIQRRSDLAYPLVSGPLPKSHHAWGPASMP
SHGGLLGVDVSGVGMGLRVSSSGNGSAYPSGALPASAITSLGQPCACQQCMLVLSVKAGT
MSTTHTLGRRPPLTKPPSPKFSSHPVPGGSYSLTLPRPPSLSRSLSPNRTSIVGATGGFS
VGGMGGPGGVSIVGGSGISNANYGFGGGFTHSLSLLGSATAALSISSTRPPPPPLPPPPP
PPPPPGTLSSSIATSAPHPSTSLSISCPGPAAPTAGPALISTAASTCTPSPSARVLGPVS
TSGAAACAAPLPPRSSLAGLSRPALQRIAMAQSRALIASGVPTVPVKNLNGSSPVHPALA
GITGILMSAAGLPVCLTRPPKLVLHPPPVSKSDIKPVPGLGHCCRKTTKKQARKGKTPEE
VVKRYLQKVRNPPEEDCTICMEALAGPSGYKGPGVGGISRAESVGRLAQCGHQYHLQCLV
AMYNNGNKDGSLQCPTCKTIYGVKTGNQPPGKMEYHVIPHSLPGHPDCKTIRIIYNIPPG
IQGPEHPNPGKPFTARGFPRHCYLPDSEKGRRVLRLLLVAWDRRLIFSVGTSSTTGESDT
VIWNEVHHKTEFGSNLTGHGYPDPGHLDNVLEELKAQGITEEECLPRD
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgttactagcgtccgccgttgtggtctgggaatggctgaacgagcacggacgctggcgg
ccctacagcccggctgtctgtcaccacatcgaggcagtcatccggagcgacccgcgctgt
ggtagcgtcgtcctcggccaggtggactctcgcctctcgccctacatcatcgatttgcat
tccatgcaccagttccgacaagacacaggtacccttcgaccggtacgacgtagcttctac
gaccccacctcagcgccaggccagggctggttgtgggagtgggagaacgacactggcagt
tggacggcgtacgacacggacgtgggcatcgccatccaggcggcacgagatcgtcagcag
ccctggctggacctggcgccgctgggtttctgctacctcattgacttcgaaagcatgacc
caaatcaacgggcagacgcaacgctgccggcgcatccagcgtcgctccgacctggcttac
ccgctggtgtcagggcccctgcccaagtcccaccacgcctggggaccggcgtcgatgccc
agccacggaggactgctcggtgtggacgtgtctggggtgggcatggggctcagggtgagc
agcagcgggaacgggagtgcgtaccccagcggcgctctccctgcatcagccatcacctct
ctgggacagccctgcgcctgtcagcagtgtatgctggtgctgagtgtcaaagcaggcacc
atgtcaaccactcacactctgggtcgaagaccgccactgaccaaaccacccagtcccaaa
ttcagcagtcaccctgttccaggagggtcgtattcactgacccttcctcggccaccgtcc
ctgtcccgatcactttccccaaacaggacgtctatagttggggcgacaggtggcttcagt
gtgggtggtatgggtgggcctggaggtgtgagtatcgtcgggggcagcggcatcagcaat
gccaactacggctttggaggaggcttcactcactctctttccctcctcggctcggccacc
gcagccctctccatctcctccacccggccccctcctccacctctgcccccacccccgccg
cctcctcctccaccaggcaccttgtcctcatccatcgccacctctgcccctcatccttcc
acctccctctccatttcctgtcctggccccgcagcgcccactgcgggccccgcactcatc
tctacggctgcctccacgtgcacgccctcgccttctgcccgcgtcctgggcccagtgtct
acgtccggtgctgctgcctgcgcggcgcctctgccgccccggtccagcctagcggggctg
agccgacctgcactgcagcgtatcgccatggctcagtcacgtgccctcattgcctctggt
gtgccaacagttccggtgaagaacctgaatggatctagccctgtgcaccctgcactggca
ggcataacaggcatcctgatgagcgcagcagggcttcctgtctgtctgacccgcccgccc
aagctggtgcttcatcctccacccgtcagcaagagtgacatcaagcccgtgcccggtctg
ggccactgctgccgcaagaccaccaagaagcaggcccgtaaaggcaagaccccagaggag
gtggtgaagcggtaccttcagaaagttcgtaatcctccagaagaggactgcaccatctgc
atggaggccctggcaggaccgtcgggctacaagggccccggcgtgggcggcatctcccgg
gctgaatcggtgggccgcctggcacagtgtggccaccagtaccacctccagtgcctcgtt
gccatgtacaacaatggcaacaaggacggcagcctgcagtgccccacctgcaaaaccatt
tacggagtcaagaccggcaaccagcccccgggcaagatggagtaccacgtcatccctcac
tcactgcccggccacccggactgtaaaaccatccggatcatttacaacatccctcctggc
atccagggcccagagcatccaaatccaggcaaacccttcaccgcccgtgggttccccaga
cactgctacctccctgacagtgagaagggacgcagggttctgaggctgctcctggtagcg
tgggaccgccggctcatcttctccgttggcacgtccagcaccaccggcgagtctgacaca
gttatctggaacgaggtgcaccacaagacggagtttggctcaaacctgacgggccacggc
taccctgaccccggccacttggacaacgtcctggaggagctcaaggctcagggcatcacc
gaggaggagtgtctacccagagactga
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