Hippoglossus hippoglossus (Atlantic halibut): 117779426
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Entry
117779426 CDS
T07778
Symbol
sf1
Name
(RefSeq) splicing factor 1 isoform X1
KO
K13095
splicing factor 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117779426 (sf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hhip03041
]
117779426 (sf1)
Spliceosome [BR:
hhip03041
]
Complex A
Other components
Complex A specific factors
117779426 (sf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
117779426
NCBI-ProteinID:
XP_034471511
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All DBs
Position
18:1252066..1262262
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AA seq
689 aa
AA seq
DB search
MATGANATPLGKLHPSIGAKRGFDAGPGSGNGLMPIPGPPATFPSIQAFQPPMPAASFPQ
PHQFSPAAGFSAQAPQPPPGAGLVSPDFGKKSRKKSRWSSETPDQKTVIPGMPTVIPPGL
TRDQERAYIVQLQIEDLTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTRKK
IEEERHSLITEMVGLNPDFKPPADYKPPATRVNDKVMIPQDEYPEINFVGLLIGPRGNTL
KNIEKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRN
ILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQNAEPRSITNTTLCTKCGG
AGHISSDCKYTSTFAAHRATGGEPPQSAQDKARMDKEYLSLMAELGEAPVPTSGGGHSHN
QGGGPRSSGPNNNQPPPQNRPPWMNSGQSENRNYHGMHGGHGGHGGHGGHGGHGGHGGHH
NYPPPMPNMGGPPLPPNPNGLPPPWMQPPPPPMGQGPGPHGHPMGLLPPPMGMMPPPPPP
PSNQPPPPPSGPLPPWQQQAPPPPPTSSMATSTPLPWQQNTTTTSSPGTGTLPPWQQPQQ
PAASGAQPPPPMGSPSMVPPPPGVQPPLPPGAPPPPPPPPPGSTGMMYAPPPPPPPMDPS
NFVTMMGMGVPGMPPFGMPPAPPPPPPQN
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggccacgggagcaaatgcgactcccttagggaagttgcaccccagtatcggcgctaaa
cgaggatttgacgctgggcctgggtcggggaacgggctgatgcccataccggggccgccc
gcaaccttcccttcgatacaagctttccagcctccgatgccagccgcatcttttccacag
ccgcaccagttcagcccggcggcggggttttcggcccaggctccccaaccacctccgggg
gccggactagtaagcccagatttcggtaagaaatccaggaagaagagtcgctggagcagc
gagacgcctgaccagaagacggtcataccaggcatgcccactgttattccacctggattg
acccgggatcaggagagagcatatatagtccaactgcagattgaagacctgactcgtaaa
ctgcgtacaggagacctgggaatccctgttaaccctgaggacaggtctccctctccggag
cccatatataacagcgagggcaagaggttaaacacccgcgagtatcgcacacggaagaag
atcgaggaggagcgccactccctcatcactgagatggttggactcaaccctgacttcaag
cctcctgcagactacaaacctccagccaccagagtcaatgacaaagttatgattccccag
gatgaataccctgaaatcaactttgttggtctgctaattgggccacgtggtaacacactg
aagaacattgagaaggagtgctgtgccaagatcatgatccgtggtaaaggttctgtaaag
gaggggaaggttggccgaaaggatggacagatgctcccaggggaggatgagcctctgcat
gccctggtcactgcgaacacaatggagaacgtcaagaaagctgtggagcagattcgtaac
atcctgaagcaaggcatcgagacacctgaggatcagaatgacctacgaaagatgcagctg
agggagcttgccagactcaatggcacactgagggaagatgacaacaggatccttcgtcct
tggcagaacgccgagccacgcagcattaccaacaccaccctctgtaccaagtgtggtgga
gctggccacatctcctctgactgcaaatacaccagcacatttgctgcccacagagcaaca
ggtggtgagcctcctcagtcggcccaggacaaggctcgtatggacaaggagtacctgtcc
ctaatggctgagctgggggaggccccagtccccacatctggaggtggacactcacacaac
cagggggggggacctcgatcctcaggccccaacaacaaccagccacctccgcagaaccgg
cctccttggatgaactctggccagtctgagaacaggaactaccatggcatgcacggaggg
cacggaggacacggaggacacggtgggcatggtgggcacggtgggcatggaggacaccac
aactaccctccccccatgcccaacatgggaggcccccctctaccccccaaccccaacggt
ctgcctcccccctggatgcagcctcctcctccccccatgggccagggtccaggacctcat
ggacaccctatgggtctgctccctcctccaatgggtatgatgccccctccacctcctccc
ccgagcaaccagccacctcccccgccttctggtccgctgccaccgtggcaacagcaggct
ccacctccccctccaaccagcagcatggcaaccagtacaccgctgccctggcaacagaat
accaccacaacgtccagccctggcactggcaccctgcctccatggcagcagccccagcag
cctgcagcctcaggggcccagcccccaccacccatgggttccccatccatggtgccgcct
ccccctggcgtccagcccccgttgccccctggcgcccctcctcctccccctccgccacct
ccaggctcgaccggcatgatgtatgcaccaccaccacccccaccacccatggacccttcc
aactttgtcaccatgatggggatgggggtaccaggcatgccccccttcggcatgcctcct
gcccccccacctcccccaccccagaattaa
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