Hungatella hathewayi: NQ487_04680
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Entry
NQ487_04680 CDS
T08453
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hhj
Hungatella hathewayi
Pathway
hhj03410
Base excision repair
hhj03430
Mismatch repair
hhj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NQ487_04680 (recJ)
03430 Mismatch repair
NQ487_04680 (recJ)
03440 Homologous recombination
NQ487_04680 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhj03400
]
NQ487_04680 (recJ)
DNA repair and recombination proteins [BR:
hhj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NQ487_04680 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NQ487_04680 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NQ487_04680 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
UWO86213
LinkDB
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Position
1041963..1043675
Genome browser
AA seq
570 aa
AA seq
DB search
MAAERWMLQTKKADFHEMAGIHHITPVTARIIRNRDIVGAEAVEKYLRGSLKDLYSPHLL
KDMDLAVEILKGKTEQGKRIRIVGDYDIDGVCSTYLLYRALTRIGANVDYEIPDRIKDGY
GINESIIRAAADDGVDTILTCDNGIAAVEQVRLAKELGLTVLITDHHDIMQEEGRDVLPP
ADAVVNPKQSGCSYPYPEICGGMVAYKLVKALYEAFSVPEEEWLSMLEFAAIATVGDVMK
LRDENRIIVKEGLKRIADTKSIGLLKLIERNDLDKDHISAYHIGFVIGPCLNAGGRLQTA
KLALALLLCEDGEEADRLAMELKELNDQRKDMTKQGTEEAIAQVEQCYRDDKVLVAYLPS
CHESLAGIIAGRLREQYQKPAFVLTDGEGCVKGSGRSIEQYHMFEGLVKVRDLLLKFGGH
PMAAGLSLEKENIDEFRRRLNEDAELTEDDFVRRIWIDVPMPFDYISEPLIEELELLEPF
GQGNEKPLFAQKGLHIRSVRVLGKNRNAVKFSLADEKGTPMDAMLFTDGDTFLEELGNRR
VIDVIYYPTVNEYNGSRTLQVIIKNYKIPV
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagaacgatggatgcttcagacgaagaaggcagactttcatgagatggcagga
atccatcatattacaccggtaacagcgagaattatccgaaacagggatattgtgggagcg
gaagcggtagagaagtatctccgcggatcgctgaaggatctgtacagtcctcatctgtta
aaggatatggatctggcggtggagattctgaagggaaagacagagcagggaaaacgaatc
cgcattgttggagattacgacatagacggtgtatgctctacctatctgctttaccgggcg
cttacaagaatcggggccaatgtggattatgagattccggaccggattaaggatggttat
ggaatcaatgaatccatcatccgcgccgcggctgatgacggcgtcgataccatcctgacc
tgtgacaacggaatcgccgctgtagagcaggtcagactggcgaaggaactggggcttacc
gtgctgattacggaccaccatgatatcatgcaggaggaggggcgcgacgtgcttccgcct
gcggatgcggtggtcaatcccaagcagagcggatgcagttatccataccctgagatatgc
ggcggaatggtagcctataagcttgtaaaggctctctacgaggcgttttccgttccggag
gaagagtggctgtccatgctggaatttgcggcgatcgccacggtaggagatgtgatgaag
ctgcgggacgaaaaccgtatcattgtcaaagagggcttaaaaagaattgcggatacgaag
agtatcggccttttaaagctgattgagcggaacgacctggataaagaccatatttctgcg
tatcacatcgggtttgtgatcggtccctgtttaaatgccggaggaagacttcagacagcc
aagcttgcgcttgcgctgctgctgtgtgaggacggggaagaggcggaccggctggctatg
gaactgaaggagttaaatgaccagagaaaagatatgacgaaacagggaaccgaggaagcc
attgcacaggtggaacagtgttaccgggatgataaggtgctggtggcatacctgccgtcc
tgccacgaatcgctggcgggaattattgccggacggctgcgggagcagtatcagaaaccg
gcgtttgtgctgaccgatggggagggctgtgtgaagggctccgggcgttccatcgagcag
taccatatgtttgaaggactggtgaaggtcagggatcttctgcttaaattcggaggtcat
cccatggcggcagggctctcgctggaaaaggagaacatcgatgaattccgccgcaggctc
aacgaggatgcagaactgacagaggatgattttgtccgaaggatctggattgatgttccc
atgcctttcgactacataagcgagcctctgattgaggaactggagcttttagaacccttt
ggacagggcaatgaaaagccgctgtttgcacagaaggggcttcacatcagaagtgtgcgt
gtgctgggaaagaaccggaacgccgtgaagttctcactggctgatgagaaggggaccccg
atggatgccatgctgtttactgacggcgatacatttttagaggaactgggaaaccgcagg
gttattgatgtgatttattatccgacggtgaatgaatacaatggcagcagaacgctgcag
gttataatcaaaaactacaaaataccggtatag
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