Hungatella hathewayi: NQ487_04865
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Entry
NQ487_04865 CDS
T08453
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
hhj
Hungatella hathewayi
Pathway
hhj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NQ487_04865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhj03019
]
NQ487_04865
Enzymes [BR:
hhj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NQ487_04865
Messenger RNA biogenesis [BR:
hhj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NQ487_04865
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
ERCC3_RAD25_C
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
UWO86248
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All DBs
Position
complement(1086795..1088093)
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AA seq
432 aa
AA seq
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MTFKDLQLSAPLLKALEEKGYTTPSPIQEKAIPHVLAGKDVLGCAQTGTGKTAAFALPII
QNLMRPSDKKHSKRVIRSLILTPTRELALQIAENFKEYGSHTPVRCAVIFGGVSAVPQIK
ELQRGIDILVATPGRLNDLIHQGEISLSHVEMFVLDEADRMLDMGFIHDVKKIISLLPVK
KQTLLFSATMPPEIQALTEKLLHNPAVVEVTPVSSIVDLIEDSLYYVDKENKRALLVHLL
KREAITSTLVFTRTKHGADRMAKFLTKNRINAAAIHGDKSQGARQKALSQFKAGTVRVLA
ATDIAARGIDIEELSCVINFDLPNVPETYVHRIGRTGRAGLGGRAISFSDIEEKAYVEDI
EKLIGKKIPVVKDHPFPMTVFTVPQKETKPRPVKNTGRNDAKRPQKSKVAQTARPRTRVS
VNASAGKRTAAK
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgacatttaaagacttacaactatcagcaccactgttaaaagcactggaggagaagggc
tataccaccccgtcccccattcaggaaaaagcaattccacacgttctggccgggaaggat
gttctgggctgcgcccagacaggcacaggaaagaccgccgcatttgcccttccgattatc
cagaacctgatgaggccatctgacaaaaaacattcaaaacgggtgatccgctcactgatt
ctcaccccgacgcgggaactggcgctgcagattgcagaaaatttcaaagaatacggttcc
catactccggtaagatgcgccgtcatattcggcggagtctccgcagttccccagatcaaa
gagctgcagcgcggcattgacattctggtagccacccccggacgtctgaatgatctgatt
caccagggcgagatcagcctgtctcatgtggaaatgttcgttttggacgaggcggaccgc
atgctggatatgggctttatccatgacgttaaaaaaattatttcactgcttcctgtcaaa
aagcagactctgctgttctcggcaaccatgccccccgagattcaggcactgaccgaaaag
ctcctgcacaatccggccgtcgtggaggtgactcccgtctcctccatcgtggacctgata
gaagattccctctactatgtggataaagagaataagcgtgcactgttggtccacctgctg
aaacgcgaagccatcacctcgacccttgtcttcacccgcaccaaacacggtgctgaccga
atggctaaatttttaacaaaaaaccggatcaatgccgccgccattcacggcgataaatct
cagggcgcacgccaaaaagcgctcagccagtttaaggcgggaacagtacgggtgctggcc
gcaactgatatcgccgccaggggtattgacatcgaagagctttcctgcgtgatcaacttt
gatctgcctaatgttcccgaaacttatgtccatcggatcggcagaaccggacgggcaggt
ctcggcggacgggccatctccttcagcgacatcgaagaaaaagcatacgtggaggatatc
gaaaagctgattggaaaaaagattccggtcgtaaaagaccatccgttccccatgaccgta
ttcaccgttccccagaaagagacgaagccccggccggtaaagaacaccggaagaaacgat
gcaaaacgtccgcaaaaaagcaaggttgcccagacggccaggccccgaacgagagtttcc
gtgaacgcctccgccggcaaacgaaccgctgctaaatga
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