Hungatella hathewayi: NQ487_08630
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Entry
NQ487_08630 CDS
T08453
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hhj
Hungatella hathewayi
Pathway
hhj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NQ487_08630 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhj03019
]
NQ487_08630 (recQ)
03400 DNA repair and recombination proteins [BR:
hhj03400
]
NQ487_08630 (recQ)
Enzymes [BR:
hhj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NQ487_08630 (recQ)
Messenger RNA biogenesis [BR:
hhj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NQ487_08630 (recQ)
DNA repair and recombination proteins [BR:
hhj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NQ487_08630 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
UWO86959
LinkDB
All DBs
Position
1971392..1973851
Genome browser
AA seq
819 aa
AA seq
DB search
MDKYQVLKQYFGYDEFREGQELLIDSILSGRDTLGIMPTGAGKSLCFQIPALMMEGITLV
ISPLISLMKDQVEALNQAGIHAAYLNSSLTASQYYRALAYAREGRYPIIYVAPERLVTEE
FLDFALNTKISMVAVDEAHCVSQWGQDFRPSYLKIVEFIDRLNVRPVVSAFTATATKEVR
DDISDILMLREPTVLTTGFDRPNLYFGVQAPKDKYATMKNFLELHPGQSGVIYCLTRKNV
EEVSDKLRADGFSVTRYHAGLSDAERKKNQEDFIYDRAAIVVATNAFGMGIDKSNVRFVI
HYNMPKNMESYYQEAGRAGRDGEPAECILLYGGQDVITNQLFIDNNRDNQELDAVTRAIV
QERDRERLRRMTFYCFTNECLRDYILRYFGEYGENYCGNCSNCLSQFETVDVTDIAKGII
GCVESSRQRYGTNVIIDTVHGANTAKIRQYHMDENPHYSELAKVPSYKLRQVINYLQLNE
YLAVTNDEYAVVKLTEKSRAVLEEGEPVVMKMAKEQEHPAKVKAEKGKKSRKGLAAGLSE
VGFSESDEALFDQLRALRSEIAKEEKVPPYIVFSDKTLTHMCVIKPKTRAEMLTVTGVGE
FKFEKYGERFLECIRAETGAAHAETAENLSERAADRAFGDSAVSPAADYDEGFAGDDLYF
SSDSGEFDDWSLDDVMAAWESGSQEPLKQEEPPVEAAAVKKKKGKSAKTEFVMTRELADE
LHYSERVSLSDFIGQINDLRDEDTMKRLTIKSVEQKLIEDGYYEEQFFNGMKRKRLTEAG
EAFGIESEKRLSEKGNEYDVFFYTEKAQRAITAWLLESV
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggataaatatcaggtattaaaacaatattttggttatgatgaattccgtgaaggccag
gagctgttaatcgacagcatcttaagcggccgggatacgctggggatcatgccgaccgga
gctggaaaatcgctgtgcttccagatcccggcgcttatgatggaggggattacgctggtg
atctcgccgctgatttctcttatgaaagaccaggtggaggcgctaaaccaggccgggatc
catgctgcctatttaaacagttctctgacggcttcccagtattaccgcgcactggcctat
gcaagggaagggcgttaccctattatctatgttgcaccggagcgtctggtgacggaagaa
tttctggattttgcattgaatacgaagatttccatggtagcggtggatgaggcccactgt
gtgtcccagtgggggcaggatttcagacccagctatttgaagattgtggaattcatcgac
cggctgaacgttcgtccggtcgtcagcgcgtttacggcgacggcgacgaaagaggtaagg
gacgatatcagcgacatcctgatgctgcgggagccgacggtactcacgacgggcttcgac
cgtccgaatctctatttcggagtccaggcaccgaaggacaagtatgcgaccatgaagaat
ttcctggaactgcatccgggacagagtggcgtgatctactgcctgaccagaaaaaatgtg
gaggaggtcagcgataagctgcgggcggacggattctctgttacaaggtaccatgccgga
ttaagcgatgcggagcgtaagaagaatcaggaggattttatctacgacagggcggcgatc
gttgtggcgaccaatgcttttggcatgggaattgataaatccaatgtccgctttgtaatc
cattataatatgccgaagaatatggagagctattatcaggaggcaggcagagccgggcga
gacggagaaccggcagaatgtatcctgctttacggcggccaggatgtgatcacaaaccag
ctgtttatcgataacaaccgggataatcaggaactggacgcggttacccgcgctatcgtc
caggagagagaccgggaacggcttcgcaggatgacgttttactgctttacgaatgagtgt
ctgcgggattacatattgaggtattttggtgagtatggtgaaaactactgcggaaactgt
tccaactgtttaagccagtttgaaacggtggatgtgacggatatcgcaaaagggatcatc
ggatgcgtggagagcagcagacagagatacggcacgaacgtgattattgatacggtgcac
ggagccaatacggcaaagatcagacagtatcatatggatgaaaatccccactactcggaa
cttgccaaagtgccgtcctacaagctgagacaggtgataaactaccttcagctcaacgaa
taccttgcggtgaccaatgacgaatacgcggtcgttaagctgactgagaaatccagggct
gtgctggaagagggcgaacccgttgtcatgaagatggcaaaggaacaggagcatcctgcg
aaggtgaaagcagaaaaaggaaagaagagccggaaagggctggcggccggtctttcggaa
gtcggtttttcagaaagcgacgaagcgctgttcgatcagctccgcgcgctgcgttccgaa
atcgcgaaagaggagaaagttccgccgtatattgtattctctgataagacgctgactcac
atgtgtgtgataaaacccaaaaccagggcagagatgctgacggtaaccggggttggggaa
tttaagtttgaaaagtatggggaaaggtttttggagtgtatcagggcggagactggagca
gctcacgcggaaacagcagagaatctttcagaaagggctgctgatcgcgcgttcggagac
tctgcggtatctccagcagcggattatgacgaaggcttcgccggcgatgatctgtatttc
agcagtgacagcggagagtttgatgactggtctctggacgatgttatggcagcatgggag
agcggaagccaggagccgctgaagcaggaggaaccaccggttgaggccgctgctgtaaaa
aagaagaaggggaaatcagccaaaacggaatttgtcatgacccgggagcttgcagatgaa
cttcactattcggaacgggtctctttaagtgattttataggacagatcaatgatcttcgg
gatgaagacaccatgaaacggctgacgatcaaatcggtagagcaaaagctgatcgaggac
ggatattatgaagaacagttttttaatgggatgaagcggaagcgtttgacggaggccgga
gaagcgttcggtattgaatcggagaagcgtctgagtgaaaagggaaacgagtacgatgtg
tttttctatacggagaaagcgcagcgggccattacggcatggctgctggaatctgtatga
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