Hungatella hathewayi: NQ487_13750
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Entry
NQ487_13750 CDS
T08453
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hhj
Hungatella hathewayi
Brite
KEGG Orthology (KO) [BR:
hhj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhj03032
]
NQ487_13750 (topA)
03400 DNA repair and recombination proteins [BR:
hhj03400
]
NQ487_13750 (topA)
Enzymes [BR:
hhj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NQ487_13750 (topA)
DNA replication proteins [BR:
hhj03032
]
Prokaryotic type
DNA Topoisomerases
NQ487_13750 (topA)
DNA repair and recombination proteins [BR:
hhj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NQ487_13750 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Toprim_4
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
UWO87909
LinkDB
All DBs
Position
3041136..3043214
Genome browser
AA seq
692 aa
AA seq
DB search
MANCLVIVESPAKVKTIKKFLGTSYEVDASNGHVRDLPKSQLGISPEQDFEPKYITIRGK
GDILAKLRKEVKKADKIYLATDPDREGEAISWHLVKALKLDEQKDKQVYRISFNEITKNA
VKASLKTPREIDMDLVDAQQTRRILDRMVGYMISPILWAKVKRGLSAGRVQSVALRMICD
REEEINAFIPEEYWNLEADLKQPGSKKALAAKFYGNKDGKIAIRNKEELDGILKELEGCD
YVVDEVKNGERIKKAPIPFTTSTLQQEASKVLNFSTQKTMRLAQQLYEGVEVKGHGTVGL
ITYLRTDSTRIAEEADTAARAFIEAQYGSKYVASGEQAKKSGAKIQDAHEAIRPTDISLT
PVIVKESLQRDLFRLYQLIWKRFAASRMQPAVYETTSVKVAAGDYCFTLAASKLAFDGFM
SVYIQEDDKEESSALLGRLEKGSVLTLEKLDSSQHFTQPPAHFTEASLVKAMEEQGIGRP
STYAPTITTIIARRYVAKENKNLYVTELGEVVNSMMKQSFPSIVDITFTANLEYLLDKVG
DGSVPWKTVVRNFYPDLKEAVDKAEVELESVTIADEVTEEICELCGRNMVIKYGPHGKFL
ACPGFPECKNTKPYLEKIGVPCPKCGKDVVIKKTKKGRIYYGCEANPECDFMSWQRPSTE
KCPKCGSYMVEKGNKLLCSNEQCGYSTSKNTK
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcgaattgtttagttattgtggagtcacccgcgaaggtgaaaacgattaaaaaattt
ttgggaacgagctatgaggttgatgcgtcaaacggtcatgtaagagacttgcctaagagc
cagctgggaatcagcccggaacaggattttgaaccgaagtatattacgatccggggcaaa
ggcgacattcttgcgaagcttcgcaaggaagtgaaaaaagcagataagatttatctcgca
acggaccctgaccgtgagggggaggcgatttcctggcatctggtaaaggcactaaagctg
gatgagcagaaggataaacaggtatacagaatcagcttcaacgagattacaaaaaatgcg
gtgaaggcttctttgaagacgccgagagagattgatatggatcttgtggacgcgcagcag
acgagaagaatcctggaccgtatggttggatatatgatcagcccgatactctgggcgaag
gtaaagcggggccttagtgccggccgcgttcagtcggtggcgctccgcatgatctgcgac
cgggaagaggagattaacgcctttattccggaagagtactggaaccttgaggcggattta
aaacagccgggaagcaagaaggctctggcagccaagttctacggcaataaagacggaaag
attgcgatccgcaataaagaagaactggatggcatcttaaaggaactggaaggctgcgat
tacgttgtggatgaggtgaagaacggagagcggatcaagaaggcgccaatcccctttacg
accagtacgctgcagcaggaagcttccaaagtactgaacttttccacacagaagacgatg
cgtctggcccagcagctgtatgaaggcgtggaggtgaaaggacacggaactgtcggtctc
attacttacctgcgtaccgattctaccagaatcgctgaggaagctgatacggcggcgaga
gcatttatcgaggcgcagtacggcagcaaatacgtggcaagcggagaacaggcgaagaag
agcggagccaaaatccaggatgcgcacgaggcgatccgtcccacagacatcagtctgaca
ccggtcattgtcaaagaatcgcttcagagggatttattccgtctctatcagctgatctgg
aaacgctttgcggcaagccgtatgcagccggctgtttatgagacgacatccgttaaggta
gcggcaggcgattactgctttacattagcggcttcaaagctggcttttgacggattcatg
tcagtttatatccaggaagacgataaagaagagagcagcgcccttctgggccggctggag
aagggaagcgtcctaaccctcgaaaagctggacagcagtcagcactttacgcagccgccg
gcacattttactgaggcgtcactggtaaaggcgatggaagaacagggaatcggccgtcca
agtacgtacgcaccgacgattacgacgatcattgccagacgctatgtggctaaggaaaat
aaaaatctttatgtgacagagcttggtgaagtcgtgaacagtatgatgaagcagagcttc
cccagcatcgtcgatatcacctttaccgctaatttagaataccttctcgataaagtggga
gacggctccgttccgtggaagactgtggtacgcaatttctacccggatttaaaggaagca
gtggataaggcggaagtcgaactggagtcagtaaccattgcggatgaagtgaccgaggag
atctgtgaactctgcggccggaacatggtaatcaaatacggtccccacggcaaattcctg
gcgtgtcccggattcccggagtgtaagaatacaaagccgtatctggagaagatcggtgtt
ccgtgtcccaagtgcgggaaggacgtggtcattaagaagacaaagaagggcagaatctat
tacggatgcgaagccaatccggaatgcgattttatgtcctggcagagaccttccactgag
aaatgtccgaaatgtggctcttatatggtcgaaaaaggcaataaactgctttgctccaac
gaacaatgcggttacagtacaagcaaaaatacaaaatag
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