KEGG   Hungatella hathewayi: NQ487_13830
Entry
NQ487_13830       CDS       T08453                                 
Name
(GenBank) PolC-type DNA polymerase III
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
hhj  Hungatella hathewayi
Pathway
hhj03030  DNA replication
hhj03430  Mismatch repair
hhj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hhj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NQ487_13830
   03430 Mismatch repair
    NQ487_13830
   03440 Homologous recombination
    NQ487_13830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hhj03032]
    NQ487_13830
   03400 DNA repair and recombination proteins [BR:hhj03400]
    NQ487_13830
Enzymes [BR:hhj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NQ487_13830
DNA replication proteins [BR:hhj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     NQ487_13830
DNA repair and recombination proteins [BR:hhj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     NQ487_13830
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T PHP DNA_pol3_finger DNA_pol3_a_NI HHH_6 tRNA_anti-codon RNase_H_2 DEDDh_C DNA_pol3_a_NII
Other DBs
NCBI-ProteinID: UWO87922
LinkDB
Position
3058911..3063551
AA seq 1546 aa
MTKAFLDVFPNLNITDELRELLNLVEVEKVTSTRDRSSIRVYIVSPRLIHKQNIYGLEKG
IKDQLFPSKQVSIKIIEKFRLSGQYTPEKLLAVYRDSILMELKNYSIIEYNIFRKTEYEF
PEPDLLKMTVEDTIVTHEKEAELKRVLEKIFFERCGLPIEVRYEYVEPKENALAKQKELQ
MQREVEEIVSRTSLAAVLNEEQALPKTGTEDGYGGPSMADAASLEALAAGYSAEVPFDEG
PARQGAADNGEIPPRRLAENGGAGAPVLRMGGKKDENKRDKNGDNGKKEQKKDYKDYKKN
GGYGGYGGKRSDNPDVLYGRDFEGETIEIEKIDGEIGEVTIRGKILMVDSRELRSGKTIM
IFDISDFTDTITVKMFAREEQLDDLKAAVQAGTFIKIKGVTTIDKFDGELTLGSVVGIKK
SEDFTGKRMDGSLEKRVELHCHTKMSDMDGVSEVKDIVKRAKKWGMPAIAVTDHGCVQSF
PDANHALDKGDTFKILYGVEGYLVDDLKLLVDNPKDQTFADTYVVFDIETTGFSPEKNRI
IEIGAVKVVNGVITDRFSTFVNPDVPIPFEIEQLTSINDNMVLSYPKIDVILPQFLEFCQ
DSVLVAHNASFDVSFINRNAEILGLPFEPTVLDTVTLARFLLPNLNRFKLDTVAKALNIS
LANHHRAVDDAGCTAEIFVKFVQMLRERGVETLTELNSLKTMTPEMIKKLPTYHVIIIAT
NDVGRVNLYKLISWSHIDYYARRPRIPKSLLNQNREGLIVGSACEAGELYQALLRGGSNA
EIARLVRFYDYLEIQPLGNNSFMLRDEKSTVNSEQDLIDINKKIVELGDQFGKPVCATCD
VHFLDPEDEVYRRIIMAGQGFKDSDEQAPLYLRTTEEMLKEFEYLGPNKAEEVVIRNTRK
IADMCEKISPVRPDKCPPVIENSDGDLRQICYDKAHAIYGDNLPTIVTERLERELNSIIS
NGFAVMYIIAQKLVWKSNEDGYLVGSRGSVGSSFVAYMSGITEVNSLSPHYYCASCHYYD
FDSEEVKKYTGMAGCDMPDKTCPVCGHPLTKDGFDIPFETFLGFKGDKEPDIDLNFSGEY
QSKAHDYTEVIFGKGQTFRAGTIGTLADKTAYGYVKNYYEEHGVHKRNCEINRIVQGCVG
VRRTTGQHPGGIIVLPHGEEIYSFTPVQRPANDMTTMTVTTHFDYHSIDHNLLKLDILGH
DDPTMIRMLQDLIGFDPVKDIPLDSREVMSLFQDTSALGITPEDIGGCKLGALGVPEFGT
DFAMQMLIDTQPKYFSDLVRIAGLAHGTDVWLGNAQTLIQEGKATIQTAICTRDDIMIYL
ISMGLEEGLSFTIMESVRKGKGLKPEWEEEMISHGVPDWYIWSCKKIKYMFPKAHAAAYV
MMAWRIAYCKVFYPLAYYAAFFSIRANGFSYELMCQGRDKLEYYLADYKKRMDTLSKKEQ
DTLRDMRIVQEMYARGYDFTPIDIYQAKARHFQIIGGKLMPSLSSIDGLGEKAADAVVDA
VKDGKFLSKEDFRNRTKVSKTVCDLMADLGLLGELPESNQLSLFDF
NT seq 4641 nt   +upstreamnt  +downstreamnt
atgacaaaagcatttttggatgtatttccaaatctgaatatcacggatgaactgcgggag
cttttaaatctggtggaagttgagaaggtcacttccaccagggatagaagctctattcgc
gtttatatcgtgagccccagactgatccacaaacagaatatctacggactggagaagggc
attaaggaccagctctttccctccaaacaggtatcgattaaaattatcgagaaattccgc
ctgtccggtcagtacacgccggagaagctgttagccgtgtaccgggacagtatcctgatg
gagcttaagaattacagcatcattgagtataatattttccggaagacggagtatgagttt
cctgagccggatctgctgaaaatgacggtggaagacaccattgttacccatgaaaaggaa
gccgagctaaagcgcgtcctggagaagatctttttcgagcgctgcggtcttccgattgag
gtgcgctacgagtacgtggagccgaaggagaatgcgctggcgaagcagaaggagcttcag
atgcagcgtgaggtggaagagatcgtcagcaggacctccctggctgccgtcttaaacgag
gagcaggcgctgccgaaaacaggaacggaggacggctatggcggcccctccatggcggat
gcagcttctttagaggcgctggctgccggatattcggcggaagtgcccttcgatgagggg
ccggcccggcagggggctgcggataacggggagattcctcctcgccgtttggcggaaaat
ggcggagcaggggctccggttctgcgtatgggcggtaaaaaggatgagaacaaacgggat
aaaaacggagataacggaaagaaagaacagaagaaagactataaggactataagaaaaac
ggcggctatggcggctacggcggaaaacgttcggacaatccggacgtgctctatggccgt
gattttgagggagagacgattgagattgagaagatcgacggagagatcggcgaggtaacc
atccgtggaaagattctcatggtggacagccgggaactgcggagcggaaagacgattatg
atcttcgatatctccgactttacggatacgattaccgtaaagatgtttgcaagagaagag
cagttagatgacttaaaggcggccgtccaggcggggacgtttattaagatcaagggtgtg
acgactattgacaagtttgacggcgaactgaccctgggctctgtagtgggtattaagaag
tcggaggacttcacgggcaagcggatggatggaagcctggagaaacgggtggagctccac
tgccatacgaagatgagcgatatggatggcgtatcagaggtcaaggatatcgtaaagcgt
gcgaaaaagtggggaatgccggccattgccgtcacagaccacgggtgcgtccagtccttc
ccggatgccaaccacgccctggacaaaggcgatacctttaagatcctgtatggggtggag
gggtatctcgttgacgatctaaagctgctggtggataatcccaaagaccagacatttgca
gatacttacgtggttttcgatatcgagaccacgggcttcagcccggaaaagaaccggatt
atcgagatcggtgccgtcaaagtggtaaacggagtgattacggacagattcagtaccttt
gtcaatccggacgtaccgattccctttgagatcgaacagctgaccagcatcaatgacaac
atggtgctttcctatccgaagatcgacgtgattctgccgcagtttctggagttctgccag
gattctgtcctggtggcgcacaacgcctccttcgatgtgagctttatcaaccgaaatgcg
gagattctggggctgccttttgaacctacagtgctggatacggtgacgctggcccggttc
cttctgccgaatttgaacagattcaagctggataccgtcgccaaggcgctgaatatctcg
ctggccaaccatcaccgcgcggtggatgacgcgggctgtacggcggagatattcgtgaag
tttgttcagatgctgcgggagcggggagtggagacgctgaccgagttaaacagcttaaag
acaatgactccggagatgatcaagaagcttccgacttaccacgtgattatcattgcgacc
aatgatgtgggacgtgtgaatctctataagctgatctcctggtcccatatcgattattac
gccagaaggcccaggattcccaagagcctgttaaatcagaaccgggagggcttaatcgtg
ggatctgcctgtgaggcgggggaactgtatcaggcactgcttcggggcggttccaatgcg
gagatcgccagactggtccggttctatgactacctggaaattcagcctctgggcaacaac
agctttatgctccgggatgaaaagagcactgtgaattcggagcaggatttgatcgacatt
aacaagaagatcgtggaactgggagaccagttcggaaaaccggtctgtgctacctgcgac
gttcattttctggacccggaggatgaggtgtaccgccggattattatggcgggacaggga
tttaaggacagtgatgaacaggcgcccctttacctgcgcacgacggaggaaatgctgaag
gaattcgagtatctcggccccaacaaggcggaagaggtagtgatcaggaacacaaggaag
atcgccgatatgtgtgagaaaatctctccggtgcgccctgataaatgtccgcccgtcatt
gaaaactctgacggggatttgcggcagatctgttatgataaggctcatgcgatctacggt
gacaatctgccgacgatcgttacggagcgtctggaacgtgaattgaactccatcatttcc
aatggattcgcggttatgtatatcatcgcgcagaagctggtgtggaaatccaacgaggac
ggatatctggttggttcccgtggttcggtcggctcttcttttgttgcctatatgtccggt
attacggaggttaattccttaagcccgcattattactgtgccagctgtcattactatgat
ttcgattcggaggaagtgaaaaagtataccggtatggccggatgtgacatgccggataaa
acctgtccggtctgcggccatccgctgacgaaagacggtttcgacattccttttgaaacg
ttcctgggatttaaaggagacaaagagccggatatcgacttaaacttctccggtgagtac
cagagtaaggcccacgactatacggaggttatcttcggcaaaggccagaccttccgggcc
ggaaccatcggtacgctggccgataagacggcatatggctatgtgaagaattactatgag
gaacacggcgtacataaacggaactgtgagattaaccgtatcgtccagggctgtgtcggg
gtgagaagaaccacgggacagcatcccggcggtatcatcgtgcttccccacggggaggaa
atttattccttcactcccgtgcagaggccggctaacgatatgacgaccatgacggtcact
acccattttgattaccactccatcgatcataacctgctgaaactcgatatactcgggcac
gatgatccgaccatgatccgaatgcttcaggacttaatcggcttcgatccggttaaggat
attccgctggacagcagggaggtcatgtccttgtttcaggatacatcggctcttgggatc
acgccggaggatatcggcggatgtaagctgggagcgctgggcgtgccggagttcggtacg
gatttcgccatgcagatgcttattgatacccagcccaagtatttttccgaccttgtgcgt
atcgccggtctggctcacggtaccgatgtgtggctgggaaacgcccagaccttaattcag
gaggggaaggcgacgattcagacggcgatctgtacccgagacgatatcatgatctatctc
atttccatgggactggaggaaggtctttcctttacgatcatggagagcgttcgaaaggga
aaaggcttaaaaccggaatgggaggaggagatgatcagccacggtgtgccggactggtac
atctggtcctgtaagaagattaaatacatgttcccgaaagcccatgcggccgcctatgtt
atgatggcgtggcgtatcgcctactgcaaggtgttttatccgctggcgtactatgcggcg
ttcttcagtatccgggcgaacggcttttcttatgaactgatgtgccagggacgagataag
ctggagtactatctggcggactataagaagcggatggatacgctgtcaaagaaggaacag
gatacactccgcgatatgagaattgttcaggaaatgtatgcgagaggctacgattttaca
ccgatcgatatctatcaggcaaaggcccgtcattttcagattatcggcgggaagctgatg
ccttctttgagcagtatcgacggtctcggtgagaaagcggccgatgccgtggttgatgct
gtgaaggacggaaagttcctgtcaaaggaagactttaggaacaggacgaaggtcagtaaa
acggtgtgcgatctgatggcagatctgggacttttaggggaactgccggagtcgaatcag
ctgtcgctgtttgatttttaa

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