Hungatella hathewayi: NQ487_20985
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Entry
NQ487_20985 CDS
T08453
Name
(GenBank) endonuclease VIII
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
hhj
Hungatella hathewayi
Pathway
hhj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hhj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NQ487_20985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhj03400
]
NQ487_20985
Enzymes [BR:
hhj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NQ487_20985
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NQ487_20985
DNA repair and recombination proteins [BR:
hhj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NQ487_20985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
Zn_ribbon_TFIIB
DNA_ligase_ZBD
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
UWO83335
LinkDB
All DBs
Position
complement(4585718..4586557)
Genome browser
AA seq
279 aa
AA seq
DB search
MIELPEAINLAKQMRETVRGKTVSAVYPPSSPHKFCWFNHEPEEYQSLLAGHTVTGAAGF
GIFSELEFDGGVRLGFNDGVNPRFIRKEEVRPKKYQLLLEFTDGSAIGFTVAMYGSISCH
SGDYDNEYYRKSIESISPLTEEFDERYFKELLASVKSAMSAKAFLAAEQRIPGLGNGCLQ
DILFQAGIHPQRKVLTLSDCEQNVLWKQVRMVLQAMTEQGGRDTEKDLFGNPGGYQTLMS
KNTVASGCPACGGGIIKETYLGGAVYYCPSCQKMEEEKR
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgattgaactgccggaggccataaatctggcaaaacagatgagagagacagtgagagga
aagacggtatcagcggtatatcccccttcctcaccccacaaattctgctggtttaaccat
gaaccggaggagtaccagtcgcttctggccggtcatacggtgacgggcgcggccggtttt
ggtatcttttcggaactggaattcgacggcggcgtcaggctggggtttaatgacggagta
aatccccgttttatccggaaggaagaggtccggccgaagaaataccagcttctcctggaa
tttacggatgggtccgcgattggatttacagtggccatgtatggcagtatttcctgccat
tcgggcgattatgataacgagtattacagaaagagtatcgagagcatttctcctctgaca
gaggaatttgatgaaaggtactttaaagaactgcttgcttctgtgaaatcggcgatgagc
gccaaggcgtttctggctgcggagcagcggattccggggcttggcaacggctgccttcag
gatattctgtttcaggcgggaatccatccgcaacgcaaggttttaaccctttcagactgt
gaacaaaatgttctgtggaaacaggtaaggatggtacttcaagccatgacggaacagggc
gggcgcgacaccgaaaaagatctctttggaaatccagggggctaccagacgctgatgtca
aagaatacagtggcttccggctgtcctgcatgcggcggagggattataaaggaaacttat
ctgggcggggcggtctattactgtccgtcgtgccagaaaatggaggaagagaagagatga
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