Hungatella hathewayi: NQ487_28905
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Entry
NQ487_28905 CDS
T08453
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hhj
Hungatella hathewayi
Pathway
hhj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hhj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NQ487_28905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhj03019
]
NQ487_28905
03009 Ribosome biogenesis [BR:
hhj03009
]
NQ487_28905
Enzymes [BR:
hhj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NQ487_28905
Messenger RNA biogenesis [BR:
hhj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NQ487_28905
Ribosome biogenesis [BR:
hhj03009
]
Prokaryotic type
rRNA helicases
NQ487_28905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
AAA_19
CMS1
Cas3-like_C_2
FtsK_alpha
Motif
Other DBs
NCBI-ProteinID:
UWO84819
LinkDB
All DBs
Position
complement(6326579..6328264)
Genome browser
AA seq
561 aa
AA seq
DB search
METLRFDELQLDERILRAVADMGFEEASPIQAQAIPVQMEGRDIIGQAQTGTGKTAAFGI
PLLQKVDPKSKKLQAIALCPTRELAIQVADEIRRLAKYMHGVKVLPIYGGQDIVKQIRSL
KDGTQIIIGTPGRVMDHMRRKTVKFDHIHTVVMDEADEMLNMGFLEDMETILSQLPEDRQ
TVMFSATMPQAIADIAHKFQKEPVTVKVVKKELTVPKVTQYYYEVKPKTKVEVMCRLLDM
YAPKLSVVFCNTKKGVDELVQALQGRGYFAEGLHGDLKQIQRDRVMNSFRNGRTDILVAT
DVAARGIDVDDVEAVFNYDLPQDDEYYVHRIGRTGRAGREGIAFSFVVGKEVYKLRDIQR
YCKTKIIPQAIPSLNDVTGIKVDKILENVADTIEESDLSEMINILEKKLLEEDYTSLDLA
AALLKMMMGEENEDIIDTREPRSLDELDSYYRGENRNGNGRGRGRNGGGRDSRYEGGRED
MARLFINIGKNQNVKPGDILGAIAGESGMPGKMVGSIDMYDKYTFVEVPRENADAVLQAM
KDVKIKGKNIHMEKANGGKGK
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggagacattgagatttgatgaattacagctagacgaaagaattttgcgggcagtagca
gacatgggatttgaggaggcttcaccgattcaggcgcaggcaattccggtacagatggag
ggcagggacatcattggccaggctcagacaggaaccggtaagacggccgcatttggtatt
ccgctgttacagaaagtagatccaaaatctaagaaactccaggcgatcgccctgtgtccc
accagagaacttgcaattcaggtggctgacgaaatccgtagattagcaaaatatatgcat
ggtgtcaaggttcttccgatttatggaggccaggacattgtaaaacagatacgttcctta
aaggatggcactcagattatcatcggtacaccgggccgtgtgatggatcatatgcgccgc
aaaacggtgaaatttgaccatattcataccgtggttatggatgaggcggatgagatgctg
aacatgggattcttagaggatatggagacgatcttaagccagcttccggaagaccgccag
acggtgatgttctccgccaccatgcctcaggcgatcgcggacatcgcgcacaagttccag
aaggagcctgtgactgtgaaggtggttaagaaagaactgaccgttccgaaggtaacccag
tattattatgaagtaaagccgaagacaaaggtagaggttatgtgccgtctgttagatatg
tacgctccaaagctttctgttgtattctgtaatacgaagaagggcgtggacgaactggta
caggcacttcagggacgtggctatttcgcagaaggcctgcacggtgatttgaagcagatt
cagcgtgaccgcgtaatgaacagcttccgtaacggcagaaccgatattctggtggctact
gatgtggctgcccgcggaatcgacgtagatgatgtggaagccgtatttaactacgatctt
ccgcaggatgatgagtactacgtacaccggatcggccgtaccggccgtgccggccgcgag
ggtatcgcattcagctttgtggttggaaaagaggtttacaagcttcgtgatatccagcgt
tactgcaagaccaagatcattcctcaggcgatcccttccctgaatgacgttaccggcatt
aaagtcgataagattttagagaatgtggcggataccatcgaggaatctgatttaagtgag
atgattaatattcttgaaaagaagcttctggaagaagattatacgtcccttgatctggcg
gcagctctgttaaagatgatgatgggcgaagaaaatgaggatattatcgatacgagagaa
ccacgttctctcgatgaattagacagctattacaggggcgaaaaccgtaatggaaacgga
cgcggaagaggcagaaacggcggcggccgtgacagccggtacgaaggcggccgtgaggat
atggcccgtctgtttatcaatatcggaaagaaccagaatgtgaagcctggagatatcctg
ggagccatcgcaggcgagtcaggcatgccgggcaagatggtcggaagcatcgatatgtac
gataagtatacatttgtggaagtgccgagagaaaacgcggatgcggtacttcaggcaatg
aaggatgtcaagatcaagggtaagaatattcatatggagaaggctaacggcggcaaggga
aaatag
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