Halorhodospira halochloris: HH1059_02720
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Entry
HH1059_02720 CDS
T06158
Name
(GenBank) DNA double-strand break repair Rad50 ATPase
Organism
hhk
Halorhodospira halochloris
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_29
AAA_21
AAA_15
AAA_27
SbcC_Walker_B
AAA_22
Adeno_IVa2
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BAU56949
UniProt:
A0A0X8XBN0
LinkDB
All DBs
Position
303041..306493
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AA seq
1150 aa
AA seq
DB search
MRLTRLEIQTLPGIEPGFAITDFGPGLNLVTGPNGSGKSSLIRALQALVVEPGPDDHFAI
AVAASFSGDGQWTVRRTGQQQVWELDGRPAHSPRLPRRDVLRCYWLTMEDLLVADERDDR
LGAELRRSLAGGYDLVALRNEEQFRVGKQNGVREAKALREAQAEQRRVEAEYADLYRQEA
QLPELDEQIDAARRAAGRSEQLRQALALLQARRRRQQVEAVLADFATGLERLRGDEMERL
NKLEQRRLNLEHELRRQGERREQARDQLAAAGFGDTPRPQAVELDSARDELEEARRAQEQ
LDQEQRQLERARASEQRARAELAGTANTEQSNPESANLISPQALHEAESLARRLQRCQAQ
QADLQGKLEGMPAATFATSHVELYWQAAHALRVWLAVGGFDARLLYAVLALALAGCGAAG
VGAYQVEDWIALGGSVLAGLGIAAAGWLAPSDDRRAAQQRFSETGLQAPSRWRADAVRER
LQELETARADLQRRQADAERAAELRNALQQVDKELAELEAERHELGHRLGFDPQLTAAAL
DRFVRLSEQLDRARDEGAAAQENCRRLEKTLEKSLARVRQHLAASGVECSAATGGLVELE
SALHELRERSRRAESAEREYHQAHSEQQRLERELDELASERGQLFEQAGLEEDQRDELAR
RCEQHPAWREQRDRLREAAAVEAERRSALASDEQLLSRVDSGDEQGLQAELEQAENEAAE
LEKLRDQASTIRTRLHDAGRDWRLEQAMAATESRQAALHERFAEGLFAEAAQVLLDNVER
EHRQHHEPQVLSDARDRFRRFTRHNYDLCLGEDFTFFARDLSQQVDRDLGELSTGTRMQL
LLAVRLAWADQLEQDRESLPLFLDEALTASDEERFVLIGATLGQMAREEGRQVFYLSARR
HELPLWQRAVGELPHVIDLAQIRFGAASDSAQVDFALPERDPVPAPGEQEPAYDYAQRIG
VPAIAPRAPAGSMHIFHLLRDDLPLLHRLLEDWRTMTLGQFEGLLDSSAAPAVIAAQTER
QRLRGRCSVARLWLNAWRYGRGTPVDRTVLERSAAVSATFIDRVAELCDGLSGDGEALIE
ALRNGEVRRFQSSKIDELAQWLEDEGYIDPATPLDAEARERQVVQDAAMIASVDEIRRVV
AWLEAGLAAA
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
gtgaggttgacgcgcctggagattcaaaccctgcccggcattgagcccggttttgctatt
accgacttcggccctgggctgaatcttgtcactggccccaatggcagcggtaagagcagc
ctgatcagggcgttacaggccttggtggtcgagccggggcctgacgatcacttcgccatt
gcggttgcggctagcttcagcggtgatggccagtggacggtcaggcgcaccggtcagcag
caggtttgggagctcgatggccgccctgcccactctccacgtctgccgcggcgcgatgtg
ctgcgctgttattggctgaccatggaggatctgctcgtcgctgacgagcgggatgatcgc
ctcggtgccgaactgcgccgcagcctagcgggcggctatgacctggtggcgttgcgtaac
gaagagcagttccgagttggcaagcaaaacggtgtgcgggaggcaaaggccttgcgcgag
gctcaggccgagcagcgccgcgtcgaagccgagtatgccgatttgtaccgccaggaggcg
cagctgcctgagctcgatgagcagatcgatgccgcacggcgggcggcggggcgcagcgag
cagctgcgccaggccttagcactgcttcaggcacggcgtcggcgtcagcaggtcgaggcg
gttttggccgacttcgcaactggcctggagcgcttgcgcggcgatgagatggagcgcctc
aataagcttgagcagcggcgtctgaatcttgagcatgaactcagacgccaaggcgagcgt
cgcgagcaggcgcgtgaccagttggccgcggccgggttcggcgatactcctcggccacag
gcggtcgagctggatagtgcccgtgatgagcttgaggaggcgcgccgtgcccaggagcag
cttgatcaggaacagcggcaattggagcgggcgcgggcgagtgagcagcgggcgcgggcg
gaacttgccggtacggctaatactgagcagagtaaccctgaatcggctaacttgatctcc
cctcaagccttacacgaggcagaaagcctggcccggcgtctgcagcgctgccaggcgcaa
caagccgatctgcagggtaagctcgagggtatgccggccgctacctttgctactagccat
gtcgagctatattggcaagcagctcacgccctgcgcgtctggctggctgtgggcggcttt
gacgctcggctgctctatgcggtcctggcgctggcgttagcaggatgcggcgcagccggg
gtaggcgcctaccaagtcgaggactggattgccctgggtggatcggtcttagccggcctg
ggcattgccgctgccggctggttggctcctagtgatgaccggcgcgcagcgcagcagcgc
tttagcgaaaccggactgcaagccccgtcgcgctggcgagccgatgccgtacgcgagcgt
ttgcaggagctggaaaccgcccgcgccgatttgcagcggcgccaggctgatgcagagcgg
gcggcggagttgcgcaatgccctgcaacaagttgataaggagttggcggagttggaagcc
gagcgccacgagcttggccaccggctggggttcgatccgcagcttaccgccgcggccttg
gatcgattcgtccgcctcagcgagcagctcgatcgggctcgggatgaaggcgccgcggca
caggagaattgccgccgcttagagaagacgctggaaaagtcgctggctcgggtacggcag
catttagcagcgagtggagttgaatgcagtgcagcaaccggcggcctggttgaactcgaa
tcggccctacatgaactgcgcgagcgcagccgccgggccgagagcgccgagcgtgaatat
catcaggcccacagcgagcagcagcgcttagagcgcgagctagatgagctcgctagtgag
cgcggccagctgtttgaacaggccgggctagaagaagatcaacgcgacgagttggcgcgg
cgctgtgagcagcacccggcctggcgcgaacagcgcgatcggctgcgtgaggcggcggcg
gtagaggctgaacggcgcagcgcgctggcgagcgatgaacagttgttgagccgggtagat
agtggtgatgagcagggtttgcaggccgaacttgaacaggccgaaaacgaggctgccgaa
ctcgagaagctgcgtgatcaagctagcacgatccgtacccggctccacgacgccggccgc
gattggcgcctggagcaggctatggctgctaccgagagccgccaagcagcgctccatgag
cgctttgctgaggggctttttgccgaggcggcgcaggtgctcttggataacgtcgagcgc
gagcaccgccagcaccatgagccgcaggtgctaagtgatgcccgcgatcggtttcgccgt
tttacgcggcataactacgacttgtgcttgggtgaggattttaccttttttgcccgcgat
ctcagtcaacaagtcgaccgtgatctgggggagctgtctacaggtacccggatgcagcta
ctattggcggtgcgcctggcctgggcagaccaactcgagcaggatcgcgagagcctgcca
ctctttctcgatgaggccttaactgccagcgatgaggagcgctttgtgctgatcggtgcc
accctcgggcagatggcccgggaagagggcaggcaggtcttttatttgagtgcccggcgc
catgagctgccactctggcagcgggcggtcggggagctgccgcacgtaatagatctggcg
cagattcgctttggcgctgcaagtgactctgcccaggtcgattttgccttgcctgaacgc
gacccggttccagcgcctggcgagcaggagccggcttacgattacgcccagcgcatcggt
gtcccggcgatagcgccgcgggcgccggcgggttcgatgcacatcttccacctattgcgt
gatgatctgccgctgctgcataggctgctggaggattggcggaccatgacgctcggtcag
ttcgaggggttgctggatagtagcgcagccccggcggtgatcgccgcccagacagagcgc
cagcgcttgcgcgggcgctgcagtgtggcgcggttgtggctaaatgcttggcggtatggt
cgcggcaccccggtcgatcggacggttctggagaggtccgcggcagtgtcagcgacattc
atcgaccgcgtcgctgagctctgtgacggccttagcggcgatggcgaagcgctgattgag
gccctgcgcaatggcgaggtgcggcgcttccagagtagtaagatcgatgagctggcgcag
tggttggaggatgaaggatatatcgatccggctacacctctcgatgccgaggcgcgcgag
cgtcaggtggtgcaggatgcagcgatgattgcttcagttgatgagattaggcgggtggtg
gcgtggttggaggccggtttggcagctgcttaa
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