Halorhodospira halochloris: HH1059_06950
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Entry
HH1059_06950 CDS
T06158
Symbol
orn
Name
(GenBank) 3'-to-5' oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
hhk
Halorhodospira halochloris
Pathway
hhk03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hhk00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HH1059_06950 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhk03019
]
HH1059_06950 (orn)
03009 Ribosome biogenesis [BR:
hhk03009
]
HH1059_06950 (orn)
Messenger RNA biogenesis [BR:
hhk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HH1059_06950 (orn)
Ribosome biogenesis [BR:
hhk03009
]
Eukaryotic type
Pre-60S particles
RNases
HH1059_06950 (orn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Pullul_strch_C
SYNE3
Motif
Other DBs
NCBI-ProteinID:
BAU57381
UniProt:
A0A0X8X887
LinkDB
All DBs
Position
721968..722519
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AA seq
183 aa
AA seq
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MGLSKWNLIWIDLEMTGLDPSQDRIIEMAAIVTDSNLDVIAESPILVINQSQQVLQNMDE
WNTKQHNQSGLIERVRSSTMDEVQAEDEMLRFLGQYVPAGVSPMCGNSICQDRRFMARWM
PRLEAYFHYRHIDVSTLKELARRWAPGVAQGVSKSGSHLALDDVRDSIAELRHYRREFMR
LPV
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgggcctttcgaaatggaacttgatttggatcgaccttgagatgaccgggctcgatccg
agtcaggatcgcataatcgagatggcggcaattgttacagatagcaacctggatgttatt
gctgaaagcccaattctggtgatcaatcaatctcagcaagtgctgcagaacatggatgaa
tggaataccaagcagcataatcagtcgggtttgatagagagggttcgctctagcactatg
gatgaggttcaagccgaggatgagatgctgcggttcctcggtcagtatgtgccggcaggt
gtctcacctatgtgcgggaatagtatatgtcaggatcggcgctttatggcgcgctggatg
ccgcgcttggaggcttatttccattaccgccacatagatgttagcacccttaaagagctg
gcacggcgttgggctccaggcgttgctcagggagtctccaaaagtggttcccatttggcg
ctcgacgatgtgcgcgactcaatcgcagagttacgtcactataggcgcgagtttatgcgc
ttgcccgtctaa
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