Halorhodospira halochloris: HH1059_07880
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Entry
HH1059_07880 CDS
T06158
Symbol
truD
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hhk
Halorhodospira halochloris
Brite
KEGG Orthology (KO) [BR:
hhk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hhk03016
]
HH1059_07880 (truD)
Enzymes [BR:
hhk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HH1059_07880 (truD)
Transfer RNA biogenesis [BR:
hhk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HH1059_07880 (truD)
Prokaryotic type
HH1059_07880 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
BAU57478
UniProt:
A0A110B548
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All DBs
Position
828071..829081
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AA seq
336 aa
AA seq
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MIPAYPPLPGTATARTYPEDFIVTEVLGFTPSGDGEHHLLQLRKRGWTTEAVAGLLARHF
GLARSAVSYAGRKDRHAETTQWFSLHAPGDKRSVEPGQIAEGVEVIAATRNDRKLRIGSL
RANKFVITLRSVEAPRGEIDKRLVTLAHHGMPNYFGEQRFGRDGDNFEQACAWLLGEKRV
RNRSMRSTLLSAARAELFNRVLAERVGEGSWDRVLSGERAMLDASHSHFAVVEADKYLAS
RARHGLVHPTGPLPGQHRDAPEGVVGQLEERVLAPAAELIAALERQGLKAQRRALRVMPR
NLRWQWRTPDRLEVSFQLPAGSYASILVREIVRTRT
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
gtgataccggcgtatcctcctctgcctggtacggcaacagcccgcacctatccggaagat
ttcatcgtcaccgaggtcctggggttcaccccctcaggcgacggcgagcatcacctgctg
cagctgcgcaagcgtggctggaccacagaggcggttgctggcttgctggctaggcatttt
ggcctcgcgcgttctgctgtctcctacgctggccgcaaggatcgccatgccgagactacg
caatggtttagccttcatgccccgggggataagcggtcagtcgagccgggccagatcgcc
gagggggtggaggtcatcgctgctactcgtaatgatcgaaaattacggataggctcattg
cgagccaacaaatttgtcatcactttgcgcagtgtggaagcccctcgcggtgaaattgac
aagcgtctggtgaccttggcccaccatggtatgcctaactactttggcgagcagcgtttt
ggccgcgatggcgataattttgagcaggcctgtgcttggttgttgggcgagaagagggta
cgtaacaggtcaatgcgcagtactctgctctctgcggcacgagctgaattgttcaatagg
gtcttggccgaacgggtcggggagggcagctgggatagggtgttgtctggtgagcgggcg
atgcttgacgctagccatagccattttgctgtcgttgaagcggataaataccttgccagt
cgggcgcggcacgggttggtgcatcccaccgggcccctgccaggacagcacagagatgcc
cctgagggtgttgtggggcagttggaggaacgagtgctagcgccagcagcggagctcata
gcggccctggagcgccaagggctaaaggcgcaacgtcgcgccttaagggtaatgccgcgc
aatttgaggtggcaatggcgaactccagacaggctagaggtatctttccagttgcctgcc
ggatcttatgctagcattttggtccgagaaattgtccgcacccggacctga
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