Halorhodospira halochloris: HH1059_08530
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Entry
HH1059_08530 CDS
T06158
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hhk
Halorhodospira halochloris
Pathway
hhk03410
Base excision repair
hhk03430
Mismatch repair
hhk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HH1059_08530 (recJ)
03430 Mismatch repair
HH1059_08530 (recJ)
03440 Homologous recombination
HH1059_08530 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhk03400
]
HH1059_08530 (recJ)
DNA repair and recombination proteins [BR:
hhk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HH1059_08530 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HH1059_08530 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HH1059_08530 (recJ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
BAU57546
UniProt:
A0A0X8X8K4
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All DBs
Position
908495..910222
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AA seq
575 aa
AA seq
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MASRIRRRAARQLPDDLSDDIHPVLRRVYARRDIATARDLDLRLSQLAPPEGMVDLYYSA
KLLAEALCERERICIVGDFDADGATATALLVTALRDMADCCGGDRQQITFLIPDRFELGY
GLSPEVVERVRPWAPKWLVTVDNGVSSNEGVAAANAAGMRVIVTDHHSPGEHLPAAEAIV
NPKRQDDNFISANLAGVGIAFYLAAAMRSYLQQNCDLTDELPNVADLLDLVAVGTVADLV
SLDTNNRILVEQGLRRIRARRARPGIYALLEQSQRKAETLVANDLAFAVGPKLNAAGRMD
DMTAGVDCLLSKEADQARSLALKLNSLNSERREVESRMTDEALEEIDQRVEDIGLGLCVS
AAGWHQGVVGILAARLKERYQCPAIAFAPGMDGTLRGSARSIPGLHIRDLLAAIKRDYPR
LIERFGGHAMAAGLTIAGDKYNEFREAFAAALHTSLGGELPQQEYATDGELSSDEINMAT
AMALRYGGPWGIGFPEPKFDGVFSVCDQQQLRGGHLRLTLGDEASAKRWEAIAFGAVEKG
YDKLQGRVRVVYSPDVREFRGKRSLQLRLDYMEPA
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
gtggcctcacgcatacgtcgccgcgctgctcggcagctacccgatgacttgtctgacgat
atacatccggttctgcgtcgtgtctatgcgcggcgtgatattgctacggcgcgagatctc
gatttgcgcctatctcaacttgccccgcccgaaggtatggtcgatctgtactattcagcc
aagttgctggcggaggcgctatgcgagcgtgagcggatctgtatagtcggtgacttcgac
gccgatggggctacagcgacagccttacttgttaccgccctgcgcgatatggccgattgt
tgtggcggcgatcgccagcaaatcacctttctcatccccgatcgctttgagttaggttac
ggtctaagccccgaggttgtcgagcgggtccggccatgggcgcctaagtggctcgttaca
gtagataatggggtcagcagcaatgaaggagtagctgcagcaaacgctgccgggatgagg
gttatagtcactgatcaccacagccctggtgagcatttgcctgcggctgaggcgatagtc
aacccgaagcgccaagacgacaattttatcagtgccaatcttgctggtgtcggcattgcg
ttctacctggccgccgctatgcgcagttatttacagcaaaattgtgacttgactgatgag
ttgccaaacgtcgccgacctgcttgatttggtggctgtcggcaccgttgctgatttggtg
tccctggataccaacaaccgcatactggtcgagcaaggattgcggcgtatccgtgctcgc
cgtgcccgccccggcatatacgccttgctcgagcagagccagcgcaaagcagagactctc
gttgccaacgacctagcctttgcagtcggaccgaaactaaatgccgcgggaaggatggat
gatatgaccgcgggtgtcgactgcttgttgagcaaggaagctgatcaggcccggtccttg
gccttgaagctcaactctctgaacagcgaacggcgtgaggttgagagccgcatgactgat
gaggcattggaggagattgatcagcgggttgaggatattggtctgggtctttgtgtcagc
gctgcaggctggcatcagggagtggtggggatactggcggcacgcttaaaagagcgctat
cagtgtccggcgatcgcctttgcccctgggatggatggtacattgcgcggttctgcgcgc
tctatacctggattgcatatcagggatcttctggccgcaatcaaacgggactatccgcgg
ttaattgagcgctttggtggccacgcgatggctgctggcctaaccatagcaggtgataag
tataatgaatttcgcgaggcttttgccgcagctctgcacaccagccttggcggcgagcta
ccgcaacaagagtacgccaccgatggggagctcagtagcgatgagataaacatggctacg
gcaatggcgctgcgctatggggggccttggggaatcgggtttccagagccaaagtttgac
ggcgtttttagcgtctgcgatcagcagcaactgcgcggtggccacttgcgacttaccttg
ggggacgaagcgtccgctaagcggtgggaagcgattgcctttggtgcagtcgagaagggt
tacgataagttacagggtagggttagggtggtttattctcccgatgtaagggagttccga
ggcaaacggtcgttacagctaagattagactacatggagcccgcgtga
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