Halorhodospira halochloris: HH1059_09440
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Entry
HH1059_09440 CDS
T06158
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hhk
Halorhodospira halochloris
Pathway
hhk03030
DNA replication
hhk03430
Mismatch repair
hhk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hhk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HH1059_09440
03430 Mismatch repair
HH1059_09440
03440 Homologous recombination
HH1059_09440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hhk03032
]
HH1059_09440
03400 DNA repair and recombination proteins [BR:
hhk03400
]
HH1059_09440
Enzymes [BR:
hhk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HH1059_09440
DNA replication proteins [BR:
hhk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HH1059_09440
DNA repair and recombination proteins [BR:
hhk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HH1059_09440
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
PAS
DNA_pol_A_exo1
PAS_9
PAS_4
PAS_8
PAS_7
DEDDh_C
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
BAU57638
UniProt:
A0A110B5E2
LinkDB
All DBs
Position
1009515..1011647
Genome browser
AA seq
710 aa
AA seq
DB search
MQPRTFVSAMVLFVTMALCAVTIIAVYGVAGAAEGSDDNRAALATAATSAVLVCMFLVWW
SLERYMLRPQRRLARNARARVESRSTENSIALPASHAVADLAEAFEELGNALKQARDESE
AVAKRATAEVDEQKAWLETILQGLREGVLVCNRQHRLLLYNRSALNILGNPESIGLGRSV
LELISGAALKHTLARLEHRYESGVSAPGDLTAPFVCSRANAQGLFHGRMALIDDGHGRIS
GYLVTLEDISAQVNRMAQREAVYRALSRDLRGVVANLRAAAEALGHPDMSAAERSSFDRV
VLDESNRLSRYIDELAEHISPDEAGAWPLADVYLADLIRCLEERLADTPDLQITLVGQPL
WIYGDSLTLLQALECLVRNIHAQSGATKIVVETLLSDRRVYVDMRWRGPAISAAELNSWL
EQPCGEVSFGGQRLIDALERHGCEPWSYADERSAEAVLRLPLLAPERPQFQAPDSAPLPA
RPEFYDFKLMHDLSTDHQFASRPLNQLRCVVFDCEMTGLDPDGGDEIISIAGVRVVNRRV
LTGETFNRIIDPGRSIPPASVRFHGLTDEDVRGQPPIEQVLPEFKQFAGDDVLVAHNAAF
DMKFLAAKEKSSGVRFDNPVLDTLLLSVLLDGEEEDHSLDNLCQRYSVTMSGRHTALGDT
LATAELLVRLFERLEARGYKTFGEVTKASHMAAELRHRSAAVSAQQSGFA
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaccacgtacctttgttagcgcaatggtgctgtttgtcaccatggccctgtgcgcc
gtcactatcattgcggtatatggagtggctggtgcagctgagggcagtgacgataaccgt
gcggctcttgccaccgcggctaccagtgctgtattagtctgcatgttcctggtttggtgg
tctttggagaggtatatgttgcggccgcagcggcgcttggcgcgcaacgctagggcacgg
gtcgaatcgcgcagcaccgagaactccatagctttgcccgcctcgcacgccgtcgctgac
cttgccgaagccttcgaagagctcggaaatgcactcaagcaggcccgtgacgagagtgag
gcggtggctaaacgggctaccgccgaggtcgatgagcagaaggcgtggctagagacaatc
ctccaaggcctgcgtgagggcgtcttggtctgcaatcggcaacaccgcctgttgctctac
aacaggtctgcactgaatatactcggcaatccggagtctattggcttgggccgctcggtt
ttagagcttatctccggcgccgcgctcaagcatacccttgcccggctcgagcaccgttat
gagagtggagtcagcgccccaggcgatctgacggcgccgtttgtgtgtagccgggccaat
gcccaggggttgtttcacgggcgcatggccctgatcgacgatggccacggcaggatcagc
ggctatctggtcacccttgaggatatctctgcgcaggtaaaccgcatggctcagcgtgag
gcggtatatcgcgccctgagccgggatctgcgcggagtggttgccaatctgcgcgcagct
gccgaggcgctgggtcatcctgacatgagtgccgccgagcgcagttcattcgaccgggtg
gtgctggatgagagtaaccgcctaagccgctatatcgatgagctggccgagcacatctcc
cctgatgaggcgggggcatggccgttagctgatgtctatctcgccgatttgatccgctgc
ctcgaggagcggctggccgatactcccgatttacaaatcaccctggtggggcagccactg
tggatctatggcgatagcctgaccctgctccaggcgctggagtgcctggtccggaatatc
cacgcgcaaagcggggcgactaagatcgtagttgagacattgctcagtgatcggcgtgtc
tacgtcgatatgcgctggcgtggtccggcaatatccgccgccgaacttaatagctggctc
gagcagccctgcggcgaggtctccttcggcggtcagcggttgattgatgccttggagcgt
cacggctgtgagccgtggagctacgccgatgagcgttccgcggaggccgtgttgcgcctg
ccgctgctcgccccggagcgaccgcagttccaggcgcccgactcggcgccgctgccggca
cgtccggagttttatgattttaaactgatgcatgatctgtcgacggatcatcagttcgct
agccgaccgcttaatcagttgcgctgcgtggtatttgactgtgagatgaccggcctcgac
ccagacggcggcgatgagattatctcgatcgccggggtgcgggtggtcaatcggcgggtt
ttgaccggtgagaccttcaaccggattatcgatccgggtcggagcattcccccggcgtcg
gtgcgctttcacggtttgaccgatgaggatgtacgcggccaaccgccgattgagcaggtt
ctgcccgagtttaagcagtttgccggggatgatgtgctagtagcccataatgccgccttc
gatatgaagtttttggcggccaaggagaagtcaagcggggtgcggtttgacaacccggtg
ctcgacacactcttgttgtcagtcctgctcgatggcgaagaggaagaccattcgctggac
aacctttgtcaacgctattcggttactatgtcgggaagacatactgcgctcggtgataca
ttggccacagctgagttgctggtacgcctattcgagcggcttgaggcccgtggctataag
acgtttggcgaagtgaccaaggcctcgcacatggccgcggagctgcgccaccgctcggca
gcggttagcgcgcaacagagtggattcgcttaa
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