Halorhodospira halochloris: HH1059_11290
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Entry
HH1059_11290 CDS
T06158
Name
(GenBank) helicase
Organism
hhk
Halorhodospira halochloris
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
DEAD
AAA_22
SWIM
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
BAU57821
UniProt:
A0A120MZU4
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All DBs
Position
complement(1201082..1204645)
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AA seq
1187 aa
AA seq
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MKRATFGRTWWGEQWLGALHKIDYSNRLPRGRRYANNGSVQDLTVNQGEIKARVKGSRRQ
PYKVSLQVPPLKAQQTRQLIDTIADDPALLAGLLNRQLDPAVLERAQKEGVPVFPGSWQE
LQMGCSCPDWAVPCKHLAAAIYLLTREIDADPFLVFRLRGIDLLAALRERGHHIAEGDGT
DEPPGLAAALSISSSAKPPQETAADPGALAELDFSQLPERVEAIPDALPQEPPVGGLNSY
RKLWRTQMRRVARHAQRALAETARSDAQGHEGQLDTLTLTPEDRPTLVLDAEDDLRIDGC
SSAAEIADLIELLSPLDAERVADLQPEVAALHAAYRTALHLTAAGAAVPWVLTVSGGSTS
VLWMPASLDQQVKNLLQTLAAGTPDSLIQLTESAADSRLDRLTRGRLLCGLFMDYWIREG
SELSDSARNDAVANLLFGGGCARLTDPGQAGTAASLHNWLRWLHLAESAQTLTLRIDEPE
PEAFELSIEVGEDPDSSGGAGAGTQNGTRPHRPLAEVLAEGGQGHSSLLRTTAMLADAYP
PLREYLRDSARKPLALTLEEIPQLLFEVLPTLQLLGVRTLLPRALERLGRPPSATMKLTS
SSSEGSGHLSANDLFRFDWQVAVGNSIVDPETFEELVAGATGLVRFRGQYVYLDPQQIER
LRRHLANPPKVDGAELTRVALTGEYAGNPVELDESAKERVAALHQEIERPQPPTLAAELR
PYQHRGFQWLYGNVRAGLGCVIADDMGLGKTVQVLALLAQLHDEGELAQRPALIVVPTSL
LSNWLREIEQFAPTLSATIYHGAQRSLPDKEEPPQIVLTTYGVARSDATRLRRRAWRVLV
ADEAQNLKNPQATQTKAVKSLSAGTRVAMSGTPVENRLAEYWSLMDFCNPGFLGPLKRFT
RDYITPIQTHGDQQAAARFRQITAPFLMRRLKTDRSIITDLPEKIEQDQYCQLTPEQSAL
YESVVREGLEVIHGTSDTFQRQGLVLQMILALKQICNHPRQYLKEGDSASEASGKMQRLL
ELLEPIHHRHEKAIIFTQFREAGSLLQDAVAATTGRSPAFLHGGLSRNQRDEIVNRFQND
RTERVLVLSLKAAGTGLNLTAASHVIHFDLWWNPAVEAQATDRAYRIGQSQTVQVHRLLT
QGTFEERINDMIQSKRALTEMTVESGEQWIGNLDDTQLSQIFSLSNS
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgcaaccttcggcagaacctggtggggtgagcagtggctcggcgccctgcat
aagatcgattactcaaaccgcttaccgcgggggcggcgctatgccaacaacggatcagtg
caggatctgaccgtaaaccagggcgagattaaggcacgggtcaaaggctcacgccgccag
ccatataaggtatccctacaagttcctcccttaaaggcacaacagacccgtcagctaatc
gataccattgcagacgacccggccctgctcgctgggctgctaaatcgccagctcgacccg
gcagtgttagagcgcgctcaaaaggagggtgtaccggtctttccgggcagctggcaggag
cttcagatgggctgttcctgtccggactgggcggtgccgtgcaagcacctagcggcggct
atatacctgttaacccgggagatagatgccgacccattcctggtcttccgattgcgcggc
atcgacctgcttgccgcgctgcgcgagcgcggtcaccatatcgctgagggtgacggcacg
gacgagccgccgggccttgccgcggcgctaagcataagtagtagcgcaaaaccgccgcaa
gagactgccgccgacccgggcgcattagcagaactagacttctcacagctgcccgagcgc
gtcgaggcgatccccgatgccctgcctcaagagccaccagtcggtgggctaaacagttac
cgtaagctctggcgcacgcaaatgcggcgtgttgcacgccatgctcagcgcgccttggcc
gagaccgcacgcagtgatgctcagggtcacgagggtcaactcgataccttgaccttgacg
ccggaagatcgcccgacgctggtgttagatgctgaggacgatttgcgtatcgacggctgc
agttcagccgccgagattgccgatcttattgagctgctctcccccctggacgccgaacgg
gttgccgacctgcagcctgaggtagcggctctgcatgcagcctaccgcacggccttgcac
ctcaccgcagcaggtgcggcagtgccctgggtactgaccgtcagcgggggaagcactagt
gttctgtggatgccagctagcctggatcagcaagtcaaaaacctccttcaaaccctagcc
gcggggactccggatagcctcatccagctgaccgaatctgccgccgatagtcggctcgac
cggctaactcgggggcgcctgctgtgcggactgtttatggattattggatccgtgagggg
agtgaactctccgacagtgcgcgcaacgatgcggtagccaatctgctgttcgggggtggc
tgtgcacgtttaaccgatccaggtcaagctggcaccgccgctagcctccacaattggcta
cgctggcttcacttagctgagtcggcgcagaccctgaccttgcgcatagatgagccggag
ccggaggccttcgagctctccattgaggttggtgaggatccggatagcagcggcggcgcg
ggggccggcacccagaatggcaccaggccccatcgaccactcgccgaggttctcgccgag
ggtggccagggccatagcagtctgctgcgcaccacggctatgcttgccgacgcctatccg
ccgctccgcgagtacctgcgcgacagtgcccgtaagccgctggcactgacccttgaggag
ataccgcagctgctctttgaggtcttaccgaccctgcagctacttggtgtacgtaccctg
ctaccccgtgccctagagcgtctcgggcggccgccgagcgcaaccatgaagcttacctcc
agcagcagcgaaggaagtggccatcttagtgccaacgacctgtttcgcttcgactggcaa
gtggcggtcgggaattcgatagttgatccggagaccttcgaggagctggttgcaggggca
accggtctagttcgctttcgtggtcaatacgtctaccttgatccgcagcaaatcgaacgt
ctgcgccgccacctagccaatccgccaaaggttgacggtgctgagttgactcgggtcgcc
cttaccggggagtacgccgggaacccggtggagttagacgagagcgctaaagaacgcgta
gcggcactgcaccaggagatcgaacgccctcagccgcccacgttagccgctgagctgcgc
ccttaccagcaccgcggtttccagtggctctacggcaacgtcagggccgggctaggctgc
gtgatcgctgacgatatgggcttgggcaagaccgtgcaggtattggcactgcttgcgcag
cttcacgacgagggtgagttggcgcagcggccagcgttgatcgtggttccgactagcctg
ctcagtaactggctgcgcgagattgagcagttcgccccgacgctgagcgctacgatctat
cacggcgctcagcgctccctgccagataaagaagagccgccacagattgtgctcaccact
tatggtgttgcgcgcagcgacgccactcgcctgcgccgtcgggcgtggcgggtgctggta
gccgatgaggcgcagaaccttaaaaacccccaggcgacccagactaaagcggtcaagtcg
ctctccgccggcacccgggtggccatgagtggcaccccggtcgagaaccgcttagccgaa
tactggagcctaatggatttctgcaatccgggctttctggggccattaaagcgcttcacg
cgcgattacatcacccctattcaaacccacggtgatcagcaagcggctgcgcgttttcgc
cagataactgcccccttcctgatgcggcgactgaagaccgaccgcagcataatcaccgat
ctgccggagaagatagagcaggatcagtactgtcagcttacccctgagcagagcgcgctg
tatgaatcggtggtgcgcgagggcctggaggttatccacggaacctctgacaccttccag
cgtcaaggcctagtgctacagatgatcctagccctcaagcagatctgtaaccatccgcgt
cagtatctcaaggagggcgatagcgccagcgaagcatctggcaagatgcagcgcctgctc
gaactccttgagccgatccaccatcgccatgagaaggcaataatcttcactcagttccgc
gaggcaggcagccttcttcaggatgcggttgccgctaccaccgggcgatccccggcattt
ctccacggcgggctttctcgtaaccagcgcgacgagattgttaaccgcttccagaacgat
cgcaccgagcgggtgttggtgttatcgcttaaggccgccggcaccggccttaacctgact
gcggcatcccatgtcatccactttgacctttggtggaacccggcagtcgaagctcaggcc
accgaccgcgcctaccgcatcggccaatctcagacggtacaggtccaccgcctgcttacc
cagggcaccttcgaggagcggatcaatgacatgatccagtccaagcgcgccctcactgag
atgacagtggaaagcggggagcaatggatcggcaatctggacgatactcaactcagccag
atcttcagtttgagcaactcatga
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